Query: cmtk-unwarp_image_phantom
OS: debian
Section: 1
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
unwarp_image_phantom(1) The Computational Morphometry Toolkit unwarp_image_phantom(1)NAMEunwarp_image_phantom - Unwarp T1-weighted MR image using a phantom descriptionSYNOPSISunwarp_image_phantom InputPhantom InputImage OutputXformDESCRIPTIONThis tool computes a B-spline free-form deformation to unwarp an image. The transformation is based on expected and detected landmarks in an image of a structural phantom acquired on the same scanner. Use the 'detect_adni_phantom' tool to detect landmarks of the ADNI Phantom in an image and generate a phantom description file suitable for use with this tool.OPTIONSGlobal Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Fitting Options --levels <integer> Number of levels in the multi-level B-spline approximation procedure. [Default: 1] --no-fit-affine Disable fitting of affine transformation to initialize spline. Instead, fit spline directly. This usually gives worse results and is discouraged. Output Options --final-cp-spacing <double> Final control point grid spacing of the output B-spline transformation. [Default: 0] --final-cp-dims <string> Final control point grid dimensions (i.e., number of control points) of the output B-spline transformation. To be provided as 'dimX,dimY,dimZ'. [Default: NONE]AUTHORSTorsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. RussakoffLICENSEhttp://www.fsf.org/licensing/licenses/gpl.htmlBUGSReport bugs at http://nitrc.org/projects/cmtk/ACKNOWLEDGMENTSFrom April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 unwarp_image_phantom(1)
Related Man Pages |
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cmtk-detect_adni_phantom(1) - debian |
cmtk-fib2image(1) - debian |
cmtk-fit_spline_dfield(1) - debian |
cmtk-mk_adni_phantom(1) - debian |
cmtk-xform2dfield(1) - debian |
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