Query: cmtk-reorient
OS: debian
Section: 1
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
reorient(1) The Computational Morphometry Toolkit reorient(1)NAMEreorient - ReorientationSYNOPSISreorient [options] new-orientation infile outfileDESCRIPTIONConvert between image orientations, i.e., physically re-order pixel array and adapt stored anatomical orientation informationOPTIONSGlobal Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --input-orientation <string>, -i <string> Override input orientation. This is a three-letter code, e.g., 'RAS', 'LPI', etc. [Default: NONE] --output-orientation <string>, -o <string> Override output orientation. Default is 'RAS', or the closest match supported by the output image file format [Default: NONE] --output-space <string> Override output coordinate space (e.g., 'RAS', 'LAS', 'LPS'). This does not affect the array order. Default is to write image in the input image space. [Default: NONE]AUTHORSTorsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. RussakoffLICENSEhttp://www.fsf.org/licensing/licenses/gpl.htmlBUGSReport bugs at http://nitrc.org/projects/cmtk/ACKNOWLEDGMENTSFrom April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 reorient(1)
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