debian man page for cmtk-overlap

overlap(1)					       The Computational Morphometry Toolkit						overlap(1)

NAME
       overlap - Overlap computation

SYNOPSIS
       overlap [options] image0 image1 [image2 ...]

DESCRIPTION
       Compute overlap measures between two or more images

OPTIONS
   Global Toolkit Options (these are shared by all CMTK tools)
       --help
	    Write list of basic command line options to standard output.

       --help-all
	    Write complete list of basic and advanced command line options to standard output.

       --wiki
	    Write list of command line options to standard output in MediaWiki markup.

       --man
	    Write man page source in 'nroff' markup to standard output.

       --version
	    Write toolkit version to standard output.

       --echo
	    Write the current command line to standard output.

       --verbose-level <integer>
	    Set verbosity level.

       --verbose, -v
	    Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
	    Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --pad-in <double>, -p <double>
	    Define padding value for input images [Default: disabled]

       --mask <string>, -m <string>
	    Mask file for optional region-based analysis [Default: NONE]

       --num-labels <integer>, -N <integer>
	    Number of label values [default: autodetect] [Default: 0]

       --first-label <integer>, -f <integer>
	    Index of first label value [default: 0]; labels below this one are ignored [Default: 0]

       --by-label
	    Analysis by label, i.e., separately for each label in given (detected) range

AUTHORS
       Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff

LICENSE
       http://www.fsf.org/licensing/licenses/gpl.html

BUGS
       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS
       From  April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and
       Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing).

CMTK 2.2.2							    Jul 20 2012 							overlap(1)