debian man page for cmtk-mk_analyze_hdr

Query: cmtk-mk_analyze_hdr

OS: debian

Section: 1

Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar

mk_analyze_hdr(1)				       The Computational Morphometry Toolkit					 mk_analyze_hdr(1)

NAME
mk_analyze_hdr - Make Analyze header file
SYNOPSIS
mk_analyze_hdr [options] [output.nii]
DESCRIPTION
Make header file according Analzye 7.5 format based on user-supplied parameters for geometry, data type, orientation, etc.
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --dims <string>, -D <string> Set dimensions in voxels --voxel <string>, -V <string> Set voxel size in [mm] --offset <float>, -O <float> Binary data file offset [Default: disabled] --char, -c 8 bits, signed --byte, -b 8 bits, unsigned --short, -s 16 bits, signed --ushort, -u 16 bits, unsigned --int, -i 32 bits signed --float, -f 32 bits floating point --double, -d 64 bits floating point --big-endian, -B Big endian data [This is the default] --little-endian, -L Little endian data --axial Set slice orientation to axial --axial-flip Set slice orientation to reverse axial --sagittal Set slice orientation to sagittal --sagittal-flip Set slice orientation to reverse sagittal --coronal Set slice orientation to corona; --coronal-flip Set slice orientation to reverse coronal --legacy Legacy mode; do not write 'SRI1' tag into header --SRI1 Force 'SRI1' tag even if not present in imported header --import <string>, -I <string> Import data from given header file. [Default: NONE] --description <string> Set description string [max. 80 characters] [Default: NONE]
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff
LICENSE
http://www.fsf.org/licensing/licenses/gpl.html
BUGS
Report bugs at http://nitrc.org/projects/cmtk/
ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 mk_analyze_hdr(1)
Related Man Pages
cmtk-concat_affine(1) - debian
cmtk-fib2image(1) - debian
cmtk-mk_phantom_3d(1) - debian
cmtk-mk_nifti_hdr(1) - debian
cmtk-overlap(1) - debian
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