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bio::mage::xml::handler::objecthandler::sql(3pm) [debian man page]

MAGE::XML::Handler::ObjectHandler::SQL(3pm)		User Contributed Perl Documentation	       MAGE::XML::Handler::ObjectHandler::SQL(3pm)

Bio::MAGE::XML::Handler::ObjectHandler::SQL - DESCRIPTION of Object SYNOPSIS
Give standard usage here DESCRIPTION
Describe the object here AUTHOR - Allen Day Email Describe contact details here CONTRIBUTORS
Additional contributors names and emails here APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ new Title : new Usage : my $obj = new Bio::MAGE::XML::Handler::ObjectHandler::SQL(); Function: Builds a new Bio::MAGE::XML::Handler::ObjectHandler::SQL object Returns : an instance of Bio::MAGE::XML::Handler::ObjectHandler::SQL Args : perl v5.10.1 2006-09-12 MAGE::XML::Handler::ObjectHandler::SQL(3pm)

Check Out this Related Man Page

MAGE::Tools::MGEDOntologyClassEntry(3pm)		User Contributed Perl Documentation		  MAGE::Tools::MGEDOntologyClassEntry(3pm)

	 use Bio::MAGE::Tools::MGEDOntologyClassEntry;
	 use Bio::MAGE::Tools::MGEDOntologyHelper;
	 use Bio::MAGE::QuantitationType::MeasuredSignal;

	 my $mo_helper = Bio::MAGE::Tools::MGEDOntologyHelper->new(
			       sourceFile => 'MGEDOntology.owl',

	 my $qt = Bio::MAGE::QuantitationType::MeasuredSignal->new(
		    identifier => 'QT1',
		    isBackground => 'false',

	 my $ont_entry = Bio::MAGE::Tools::MGEDOntologyClassEntry->new(
			   parentObject => $qt,
			   className => 'QuantitationType',
			   association => 'DataType',
			   values => {
				   DataType => 'float',
			   ontology => $mo_helper,

       This provides functionaliy for an ontology-aware OntologyEntry class for entries of type Class.

       Bio::MAGE::Tools::MGEDOntologyClassEntry is a concrete class.

       Superclass is: Bio::MAGE::Tools::MGEDOntologyEntry

       Subclasses are: none

       Attributes are simple data types that belong to a single instance of a class. In the Perl implementation of the MAGE-OM classes, the
       interface to attributes is implemented using separate setter and getter methods for each attribute.

	   Stores the name of the equivalent class or property in the MGED Ontology for this OntologyEntry

	   Stores true if the class is an instantiable one.

	   Contains a hash reference to a list of OM clases that are circular references which should only be followed one level.

Please send bug reports to the project mailing list: (mged-mage 'at' lists 'dot' sf 'dot' net) AUTHOR
Eric W. Deutsch (edeutsch 'at' systemsbiology 'dot' org) followup work by Jason E. Stewart (jasons 'at' cpan 'dot' org) SEE ALSO
perl(1). POD ERRORS
Hey! The above document had some coding errors, which are explained below: Around line 655: You forgot a '=back' before '=head1' perl v5.10.1 2006-08-23 MAGE::Tools::MGEDOntologyClassEntry(3pm)
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