debian man page for swiss::genegroup

SWISS::GeneGroup(3pm)					User Contributed Perl Documentation				     SWISS::GeneGroup(3pm)

Name
       SWISS::GeneGroup.pm

Description
       A SWISS::GeneGroup object contain all synonyms for a given gene name. See SWISS::GNs for a description of the gene name format.

Inherits from
       SWISS::BaseClass.pm

       (also implements many methods from SWISS::ListBase.pm)

Attributes
       "Names"
	     Each list element is a SWISS::GN object, describing a primary name
	     or synonym. Concatenation of Name and Synonyms lists.

       "OLN"
	     Each list element is a SWISS::GN object, describing an
	     OrderedLocusName.

       "ORFNames"
	     Each list element is a SWISS::GN object, describing an ORFName.

Methods
   Standard methods
       new
       fromText
       toText

   Specific methods
       Name
	   Returns the Name (primary name).

       Synonyms
	   Returns the Synonyms.

       elements
	     Concatenates all elements from Names, OLN and ORFNames in
	     a single array.

   List manipulation methods
       Since GeneGroup was a previous implementation of SWISS::ListBase, the list manipulation methods below are provided to facilitate
       compatibility.

       size
       isEmpty
       elements
       filter
       get (deprecated)
       head (deprecated)
       tail (deprecated)
       item (deprecated)
       push (deprecated)
       pop (deprecated)
       shift (deprecated)
       splice (deprecated)
       unshift (deprecated)
       set (deprecated)
       add (deprecated)

perl v5.10.1							    2006-01-26						     SWISS::GeneGroup(3pm)