debian man page for bio::map::linkageposition

Query: bio::map::linkageposition

OS: debian

Section: 3pm

Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar

Bio::Map::LinkagePosition(3pm)				User Contributed Perl Documentation			    Bio::Map::LinkagePosition(3pm)

NAME
Bio::Map::LinkagePosition - Create a Position for a Marker that will be placed on a Bio::Map::LinkageMap
SYNOPSIS
use Bio::Map::Position; my $position = Bio::Map::LinkagePosition->new(-positions => 1, -distance => 22.1 ); # can get listing of positions my @positions = $position->each_position;
DESCRIPTION
Position for a Bio::Map::MarkerI compliant object that will be placed on a Bio::Map::LinkageMap. See Bio::Map::MarkerI and Bio::Map::LinkageMap for details
FEEDBACK
Mailing Lists User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists Support Please direct usage questions or support issues to the mailing list: bioperl-l@bioperl.org rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible. Reporting Bugs Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web: https://redmine.open-bio.org/projects/bioperl/ AUTHOR - Chad Matsalla Email bioinformatics1@dieselwurks.com
CONTRIBUTORS
Lincoln Stein, lstein@cshl.org Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Jason Stajich jason@bioperl.org Sendu Bala bix@sendu.me.uk
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ new Title : new Usage : my $obj = Bio::Map::LinkagePosition->new(-positions => $position, -distance => $distance); Function: Builds a new Bio::Map::LinkagePosition object Returns : Bio::Map::LinkagePosition Args : -order => the relative order of this marker on a linkage map -positions => positions on a map Bio::Map::PositionI methods order Title : order Usage : $o_position->order($order) my $order = $o_position->order() Function: get/set the order position of this position in a map Returns : int Args : none to get, int to set perl v5.14.2 2012-03-02 Bio::Map::LinkagePosition(3pm)
Related Man Pages
bio::map::cytomap(3pm) - debian
bio::map::linkageposition(3pm) - debian
bio::map::orderedposition(3pm) - debian
bio::map::positionhandler(3pm) - debian
bio::map::relativei(3pm) - debian
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