Query: bio::liveseq::dna
OS: debian
Section: 3pm
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
Bio::LiveSeq::DNA(3pm) User Contributed Perl Documentation Bio::LiveSeq::DNA(3pm)NAMEBio::LiveSeq::DNA - DNA object for LiveSeqSYNOPSIS# documentation neededDESCRIPTIONThis holds the DNA sequence (or the RNA in the case of cDNA entries) and is accessed by exons, genes, transcripts... objects AUTHOR - Joseph A.L. Insana Email: Insana@ebi.ac.uk, jinsana@gmx.netAPPENDIXThe rest of the documentation details each of the object methods. Internal methods are usually preceded with a _ new Title : new Usage : $dna = Bio::LiveSeq::DNA->new(-seq => "atcgaccaatggacctca", -offset => 3 ); Function: generates a new Bio::LiveSeq::DNA Returns : reference to a new object of class DNA Errorcode -1 Args : a string AND an optional offset to create nucleotide labels (default is 1, i.e. starting the count of labels from "1") -> do not bother using it -> it could be used by alternative loaders !EMBL format NOTE : strand of DNA is set to 1 by default perl v5.14.2 2012-03-02 Bio::LiveSeq::DNA(3pm)