debian man page for bio::factory::ftlocationfactory

Bio::Factory::FTLocationFactory(3pm)			User Contributed Perl Documentation		      Bio::Factory::FTLocationFactory(3pm)

NAME
       Bio::Factory::FTLocationFactory - A FeatureTable Location Parser

SYNOPSIS
	   # parse a string into a location object
	   $loc = Bio::Factory::FTLocationFactory->from_string("join(100..200,
								400..500");

DESCRIPTION
       Implementation of string-encoded location parsing for the Genbank feature table encoding of locations.

FEEDBACK
   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the
       Bioperl mailing list.  Your participation is much appreciated.

	 bioperl-l@bioperl.org			- General discussion
	 http://bioperl.org/wiki/Mailing_lists	- About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address
       it. Please include a thorough description of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the
       web:

	 https://redmine.open-bio.org/projects/bioperl/

AUTHOR - Hilmar Lapp
       Email hlapp at gmx.net

CONTRIBUTORS
       Jason Stajich, jason-at-bioperl-dot-org Chris Fields, cjfields-at-uiuc-dot-edu

APPENDIX
       The rest of the documentation details each of the object methods.  Internal methods are usually preceded with a _

   new
	Title	: new
	Usage	: my $obj = Bio::Factory::FTLocationFactory->new();
	Function: Builds a new Bio::Factory::FTLocationFactory object
	Returns : an instance of Bio::Factory::FTLocationFactory
	Args	:

   from_string
	Title	: from_string
	Usage	: $loc = $locfactory->from_string("100..200");
	Function: Parses the given string and returns a Bio::LocationI implementing
		  object representing the location encoded by the string.

		  This implementation parses the Genbank feature table
		  encoding of locations.
	Example :
	Returns : A Bio::LocationI implementing object.
	Args	: A string.

   _parse_location
	Title	: _parse_location
	Usage	: $loc = $locfactory->_parse_location( $loc_string)

	Function: Parses the given location string and returns a location object
		  with start() and end() and strand() set appropriately.
		  Note that this method is private.
	Returns : A Bio::LocationI implementing object or undef on failure
	Args	: location string

perl v5.14.2							    2012-03-02				      Bio::Factory::FTLocationFactory(3pm)