bp_query_entrez_taxa(1p) debian man page | unix.com

Man Page: bp_query_entrez_taxa

Operating Environment: debian

Section: 1p

BP_QUERY_ENTREZ_TAXA(1p)				User Contributed Perl Documentation				  BP_QUERY_ENTREZ_TAXA(1p)

NAME
query_entrez_taxa - query Entrez taxonomy database and print out information
USAGE
query_entrez_taxa "Homo sapiens" "Saccharomyces cerevisiae" Rhizopus Metazoa query_entrez_taxa -gi 28800981 -gi 54301680 -db nucleotide query_entrez_taxa -gi 71836523 -db protein Provide the genus and species name in quotes, you can also query for a non-species node like Family or Order Command-line options: -v or --verbose : print verbose debugging info -gi : one or many GI numbers to lookup taxon id for -db : the sequence db (nucleotide or protein) the GI is for other arguments are assumed to be species names to lookup in taxonomy db
AUTHOR
Jason Stajich jason-at-bioperl-dot-org perl v5.14.2 2012-03-02 BP_QUERY_ENTREZ_TAXA(1p)
Related Man Pages
bp_mask_by_search(1p) - debian
bio::taxon(3pm) - debian
bio::taxonomy(3pm) - debian
bio::tools::analysis::protein::elm(3pm) - debian
go::metadata::panther(3pm) - debian
Similar Topics in the Unix Linux Community
Adding the individual columns of a matrix.
Detecting unused variables...
One instance of comparing grep and awk
Find columns in a file based on header and print to new file
New UNIX and Linux History Sections