debian man page for libscanout

LIBSCANOUT(1e)						     EMBOSS Manual for Debian						    LIBSCANOUT(1e)

NAME
       libscanout - Reads a DHF file and writes a file of top-scoring Classes, Folds and Superfamilies.

SYNOPSIS
       libscanout -dhfinfile infile -outfile outfile

       libscanout -help

DESCRIPTION
       libscanout is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Protein:3D
       Structure" command group(s).

OPTIONS
   Input section
       -dhfinfile infile
	   This option specifies the location of the DHF file (domain hits file) (input). A 'domain hits file' contains database hits (sequences)
	   with domain classification information, in FASTA or EMBL formats. The hits are relatives to a SCOP or CATH family and are found from a
	   search of a sequence database. Files containing hits retrieved by PSIBLAST are generated by using SEQSEARCH.

   Required section
   Output section
       -outfile outfile
	   This option specifies the location of the summary file (output). The summary file contains lists of domain Classes, Superfamilies and
	   Families rank-ordered on the basis of score (highest-scoring first).

BUGS
       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers
       (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO
       libscanout is fully documented via the tfm(1) system.

AUTHOR
       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
	   Wrote the script used to autogenerate this manual page.

COPYRIGHT
       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as
       EMBOSS itself.

DOMAINATRIX 0.1.0+20100721					    08/11/2010							    LIBSCANOUT(1e)