MIPECHECKSANITY(1) User Contributed Perl Documentation MIPECHECKSANITY(1)NAME
mipeCheckSanity.pl - Check sanity of MIPE file, focussing on contents (vs 'form', that can be checked using xmllint)
based on MIPE version v0.9
arguments: * mipe_file
* (optional) list of PCR IDs
SYNOPSIS
mipe2genotypes.pl your_file.mipe <pcr_id1> <pcr_id2>
ADDITIONAL INFO
See http://mipe.sourceforge.net
AUTHOR
Jan Aerts (jan.aerts@bbsrc.ac.uk)
perl v5.14.2 2005-07-20 MIPECHECKSANITY(1)
Check Out this Related Man Page
Math::Symbolic::ExportConstants(3pm) User Contributed Perl Documentation Math::Symbolic::ExportConstants(3pm)NAME
Math::Symbolic::ExportConstants - Export constants used for Math::Symbolic
SYNOPSIS
use Math::Symbolic::ExportConstants qw/:all/;
DESCRIPTION
This just exports a number of constants on demand. Usually, you'd want to rather use Math::Symbolic instead. Math::Symbolic allows you to
optionally export the same constants as this module, but using the ':constants' tag instead of the ':all' tag that you'd have to use with
this module.
Please refer to the documentation of the Math::Symbolic module for a list of constants.
EXPORT
None by default. But since exporting symbols is the only functionality of this module, you'll want to export the :all group of constants.
AUTHOR
Please send feedback, bug reports, and support requests to the Math::Symbolic support mailing list: math-symbolic-support at lists dot
sourceforge dot net. Please consider letting us know how you use Math::Symbolic. Thank you.
If you're interested in helping with the development or extending the module's functionality, please contact the developers' mailing list:
math-symbolic-develop at lists dot sourceforge dot net.
List of contributors:
Steffen Mueller, symbolic-module at steffen-mueller dot net
Stray Toaster, mwk at users dot sourceforge dot net
Oliver Ebenhoeh
SEE ALSO
New versions of this module can be found on http://steffen-mueller.net or CPAN. The module development takes place on Sourceforge at
http://sourceforge.net/projects/math-symbolic/
Math::Symbolic
perl v5.10.1 2011-01-01 Math::Symbolic::ExportConstants(3pm)
I have a huge matrix file containing some 1.5 million rows and 6000 columns. The matrix looks something like this:
1 2 3
4 5 6
7 8 9
3 4 5
I want to add all the numbers in the columns of this matrix and display the result to my stdout. This means that the numbers in the first column are:
... (2 Replies)
Hi,
Just trying to get to grips with sed and awk for some reporting for work and I need some assistance:
I have a file that lists policy names on the first line and then on the second line whether the policy is active or not.
Policy Name: Policy1
Active: yes
Policy... (8 Replies)
version info :
vi availabe with RHEL 5.4
I have a text file with 10,000 lines. I want to copy lines from 5000th line to 7000th and redirect to a file. Any idea how I can do this?
Note:
The above scenario is just an example. In my actual requirement, the file has 14 million lines and I want... (9 Replies)
Hi everyone,
I know the following questions are noobish questions but I am asking them because I am confused about the basics of history behind UNIX and LINUX.
Ok onto business, my questions are-:
Was/Is UNIX ever an open source operating system ?
If UNIX was... (21 Replies)
Hello,
I couldn't find an actual introduction thread, so I decided to just put this here.
I go by d0wngrade online. I have been programming in multiple languages for about 15+ years. I started with standard web design languages like HTML and CSS, but I then advanced from design to development... (2 Replies)
Hi guys...
The first active code line in AudioScope.sh is set -u .
This causes a complete exit if a variable is used/found but has not been allocated at the start of the program.
However, apart from writing code to do the task, is there a switch to to check which variables have been... (17 Replies)
Hi.
In thread https://www.unix.com/shell-programming-and-scripting/267833-grouping-counting.html rovf and I had a mini-discussion on grep and awk.
Here is a demo script that compares the awk and grep approaches for this single problem:
#!/usr/bin/env bash
# @(#) s2 Demonstrate group... (1 Reply)
Hello,
I have to fish out some specific columns from a file based on the header value. I have the list of columns I need in a different file. I thought I could read in the list of headers I need,
# file with header names of required columns in required order
headers_file=$2
# read contents... (11 Replies)
For those interested in installing dash shell on OSX Lion to help test POSIX compliancy of shell scripts, it is quite easy. I did it like this:
If you don't have gcc on your system:
0. Download and install the Command Line Tools for Xcode package from Sign In - Apple *
1. Download the dash... (2 Replies)
Hello and thanks in advance for any help anyone can offer me
I'm trying to learn the find command and thought I was understanding it... Apparently I was wrong. I was doing compound searches and I started getting weird results with the -size test. I was trying to do a search on a 1G file owned by... (14 Replies)
I have data of an excel files as given below,
file1
org1_1 1 1 2.5 100
org1_2 1 2 5.5 98
org1_3 1 3 7.2 88
file2
org2_1 1 1 2.5 100
org2_2 1 2 5.5 56
org2_3 1 3 7.2 70
I have multiple excel files as above shown.
I have to copy column 1, column 4 and paste into a new excel file as... (26 Replies)
Dear All,
Taking a break from Vue.js coding for the site, SEO and YT videos; and hopefully addressing some well deserved criticism from some here that I have been too focused on the visual aspects of the forums versus the substance and the community....
While the "current generation... (9 Replies)
Hi all...
Well guys and gals, I jumped in at the deep end and found things that PERL cannot do by default.
Many tricky terminal escape codes are not catered for so I had to create workarounds.
One thing I searched for was this:
Passing perl variable to shell command
AND, @Neo this was... (15 Replies)