minccopy(1) [debian man page]

MINCCOPY(1)							 MINC User's Guide						       MINCCOPY(1)

NAME

       minccopy - copy minc image values from one minc file to another

SYNOPSIS

       minccopy [-pixel_values] [-real_values] infile outfile

DESCRIPTION

       minccopy  copies image values from one minc file to another.  Both the input and output files must exist, and the images in both files must
       have an equal number dimensions and equal dimension lengths.

       By default the real value of each pixel is copied.  Use the -pixel_values to copy the pixel values instead.

       NOTE: This program is intended primarily for use with scripts such as mincedit.	It does not follow the typical design rules of	most  MINC
       command-line tools and therefore should be used only with caution.

OPTIONS

       -pixel_values Copy voxel values in raw mode.

       -real_values Copy voxel intensities (default).

       -help Print summary of command-line options and exit.

       -version Print version number of program and exit.

AUTHOR

       Peter Neelin

COPYRIGHTS

       Copyright (C) 1993 by Peter Neelin

							   $Date: 2004-05-20 21:52:08 $ 					       MINCCOPY(1)

ecattominc(1)															     ecattominc(1)

NAME

       ecattominc - convert an ecat format file (version 6.x or 7.x) to a minc format file

SYNOPSIS

       ecattominc [<options>] <infile> <outfile.mnc>

       ecattominc [-help]

DESCRIPTION

       ecattominc will convert an ecat data file (version 6.x or 7.x) to a minc file format Unless the -small_header option is specified, ecattom-
       inc will conserve the maximum informations from the ecat header and subheader fields which will be respectively stored as attributes of the
       ecat-main  and ecat-subhdr minc variables.  By default the whole 3D or 4D volume is converted, however, ecattominc allows for the selection
       of slice and frame ranges to be copied.	The voxel values of the generated minc file are decay corrected, unless the  nodecay_correct  flag
       is specified.  Finally, blood data file can be inserted within the minc file with the -bloodfile option.

OPTIONS

       Note that options can be specified in abbreviated form (as long as they are unique) and can be given anywhere on the command line.

General options
       -byte: Write out data as bytes (default).

       -short: Write out data as short integers.

       -clobber: Overwrite existing file.

       -noclobber: Don't overwrite existing file (default).

       -verbose: List files as they are converted (default)

       -quiet: Do not list files as they are converted.

Command specific options
       -decay_correct: Do decay correction on images (default).

       -nodecay_correct: Don't do decay correction.

       -slices:Range of slices to copy (counting from 0).
	       Default value: -2147483648 -2147483648

       -frames: Range of frames to copy (counting from 0).
	       Default value: -2147483648 -2147483648

       -frame: Single frame to copy (counting from 0).
	       Default value: -2147483648

       -small_header: Copy only basic header information.

       -all_header: Copy all header information (default).

       -bloodfile: Insert blood data from this file.

Generic options for all commands
       -help: Print summary of command-line options and abort

KNOWN BUGS

       No bug listed so far :=)

SEE ALSO

       minctoecat(1), rawtominc(1), minctoraw(1), dicomtominc(1)

AUTHOR

       Peter Neelin and Anthonin Reilhac (anthonin.reilhac@cermep.fr)

COPYRIGHTS

       Copyrights 2005 by Peter Neelin

																     ecattominc(1)