Query: gbseqget
OS: debian
Section: 1
Format: Original Unix Latex Style Formatted with HTML and a Horizontal Scroll Bar
GBSEQGET(1) NCBI Tools User's Manual GBSEQGET(1)NAMEgbseqget - format sequences from GenBank as an XML GBSetSYNOPSISgbseqget [-] [-d filename] [-i filename] [-m n/p/b] [-n] [-o filename] [-v]DESCRIPTIONgbseqget retrieves biological sequence data from GenBank (according to an input list of GI accession numbers) and prints it out as an XML GBSet document.OPTIONSA summary of options is included below. - Print usage message -d filename Input file name for date list (desired accessions, one per line, followed by a blank line and a list of allowed dates, also one per line) -i filename Input file name for GI list (default = stdin) -m n/p/b Molecule type: n Nucleotide (default) p Protein b Both -n Return only new records (for which the given GI refers to an old version) -o filename Output file name for the XML GBSet (default = stdout) -v Fetch SNP VariationsNOTESThe GBSet format is deprecated in favor of INSDSet, which you can produce by running insdseqget in place of gbseqget.AUTHORThe National Center for Biotechnology Information.SEE ALSOasn2gb(1), insdseqget(1).NCBI2006-04-14 GBSEQGET(1)
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