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cmtk-fit_spline_dfield(1) [debian man page]

fit_spline_dfield(1)				       The Computational Morphometry Toolkit				      fit_spline_dfield(1)

NAME
fit_spline_dfield - Deformation Field to Transformation SYNOPSIS
fit_spline_dfield InputDField OutputXform DESCRIPTION
Fit a parametric nonrigid transformation (B-spline free-form deformation) to a deformation field OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Input Options --absolute Input is an absolute transformation field [x maps to input(x)] [This is the default] --relative Input is relative deformation field, e.g., a gradient or force field [x maps to x+input(x)] Fitting Options --levels <integer> Number of levels in the multi-level B-spline approximation procedure. [Default: 1] --fit-affine-first Fit affine transformation first, then initialize spline with it. Output Options --final-cp-spacing <double> Final control point grid spacing of the output B-spline transformation. [Default: 0] --final-cp-dims <string> Final control point grid dimensions (i.e., number of controlpoints) of the output B-spline transformation. To be provided as 'dimX,dimY,dimZ'. [Default: NONE] AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff LICENSE
http://www.fsf.org/licensing/licenses/gpl.html BUGS
Report bugs at http://nitrc.org/projects/cmtk/ ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 fit_spline_dfield(1)

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regress(1)					       The Computational Morphometry Toolkit						regress(1)

NAME
regress - Regression SYNOPSIS
regress [options] controlFile DESCRIPTION
Linear (and higher-order polynomial) regression of deformation fields and images. OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --output <string>, -o <string> File name for output. [Default: NONE] --parameters <string>, -p <string> Model parameters for regression instantiation [Default: NONE] --substitution <string>, -s <string> Printf format string for ID-to-path substitition [Default: %s ] --order <integer>, -O <integer> Polynonial order of the regression [default: 1=linear] [Default: 1] AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff LICENSE
http://www.fsf.org/licensing/licenses/gpl.html BUGS
Report bugs at http://nitrc.org/projects/cmtk/ ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 regress(1)
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