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ballview(1) [debian man page]

BALLView(1)						      General Commands Manual						       BALLView(1)

NAME
BALLView - A free molecular modeling and molecular graphics tool SYNOPSIS
BALLView [Molecular-file] DESCRIPTION
BALLView BALLView provides fast OpenGL-based visualization of molecular structures, molecular mechanics methods (minimization, MD simula- tion using the AMBER and CHARMM force fields), calculation and visualization of electrostatic properties (FDPB). BALLView is based on BALL (Biochemical Algorithms Library) , which is currently being developed in the groups of Oliver Kohlbacher (Univer- sity of Tuebingen, Germany), Andreas Hildebrandt (Saarland University, Saarbruecken, Germany), and Hans-Peter Lenhof (Saarland University, Saarbruecken, Germany). BALL is an application framework in C++ that has been specifically designed for rapid software development in Molecular Modeling and Computational Molecular Biology. It provides an extensive set of data structures as well as classes for Molecular Mechanics, advanced solvation methods, comparison and analysis of protein structures, file import/export, and visualization. BALLView is available under the LGPL licence. Homepage: www.BALLView.org USAGE
To run BALLView, simply type: BALLView or BALLView file.pdp where file.pdb is your PDB file. BALLView also supports HIN, MOL, MOL2 and SD files. BALLView provides HTML documentation, that is available in the application itself (see Help menu). This package also includes Python example scripts, that can be run in BALLView. They can be found under /usr/share/BALL/PYTHON. AUTHOR
BALLView is copyright 1998-2009 by the BALL project group SEE ALSO
http://www.ballview.org 24 January 2009 BALLView(1)

Check Out this Related Man Page

qutemol(1)						      General Commands Manual							qutemol(1)

NAME
qutemol - interactive visualization of macromolecules SYNOPSIS
qutemol DESCRIPTION
This manual page documents briefly the QuteMol program. QuteMol is an open source (GPL), interactive, high quality molecular visualization system. QuteMol exploits the current GPU capabilites through OpenGL shaders to offers an array of innovative visual effects. QuteMol visualization techniques are aimed at improving clarity and an easier understanding of the 3D shape and structure of large molecules or complex proteins. Real Time Ambient Occlusion Depth Aware Silhouette Enhancement Ball and Sticks, Space-Fill and Liquorice visualization modes High resolu- tion antialiased snapshots for creating publication quality renderings Automatic generation of animated gifs of rotating molecules for web pages animations Real-time rendering of large molecules and protein (>100k atoms) Standard PDB input. CITING QUTEMOL
If you use images made with QuteMol in a scientific paper or book, please cite the paper that presented QuteMol: Marco Tarini, Paolo Cignoni, Claudio Montani (2006) Ambient Occlusion and Edge Cueing for Enhancing Real Time Molecular Visualization, IEEE Transactions on Visualization and Computer Graphics 12(5), 1237-1244. AUTHOR
QuteMol was written by Marco Tarini and Paolo Cignoni of the Visual Computing Lab at ISTI-CNR. This manual page was written by Morten Kjeldgaard <mok@bioxray.au.dk>, for the Debian project (but may be used by others). January 2008 qutemol(1)
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