debian man page for imagesetstatistics

IMAGESETSTATISTICS(1)						   User Commands					     IMAGESETSTATISTICS(1)

NAME
       ImageSetStatistics - part of ANTS registration suite

DESCRIPTION
       Usage: ./ImageSetStatistics ImageDimension controlslist.txt outimage.nii whichstat {roi.nii} {imagelist2forsimilarityweightedstats.txt}

       whichstat = 0:
	      median,	1:  max prob appearance  , 2: weighted mean appearance ,  3: trimmed mean , 4 : max value , option 5 : similarity-weighted
	      (must pass imagelist2 as well) else median , option 6 : same as similarity-weighted option 5 but the label corresponds to the  image
	      that  provides  the  best  local match ... useful if you want to MRF smooth these indices  , option 7 : similar to 5 but expects the
	      max-value to be stored in the ROI image and uses it to get the intensity ...

       example:
	      ImageSetStatistics  3   imagelist.txt  maxvalueimage.nii.gz 4

	      similarity weighted --- pass in a list of similarity images here which will be used to select the best label  ---  thus,	number	of
	      similarity images must match the number of label images .

ImageSetStatistics 1.9						     May 2012						     IMAGESETSTATISTICS(1)