Sponsored Content
Top Forums Programming How to make use others' C library installed not for the system-wide (Ubuntu/Linux)? Post 303043003 by GRMartin on Wednesday 15th of January 2020 03:38:09 PM
Old 01-15-2020
Quote:
Originally Posted by yifangt
Thanks!

Does the -L option ensure the sub-directories are searched recursively?


No. Each folder requires a -L entry.



Quote:
Originally Posted by yifangt


The -lhtslib-1.10.2 option of your command line may be wrong in this case as htslib-1.10.2 is a folder under which there are several sub-folders and many *.c *.h *.o *.pico files, but I understand your point. Two files: libhts.so and libhts.a may be the ones I need(permission is checked to be correct). So I tried:


I presumed htslib-1.10-2 was your library. The -l option is for the library itself. If the library is libhts.so then use -lhts


Quote:
Originally Posted by yifangt


Could it be possible for you to download the library to have a look at the code? That may be easier than what I explained.
Thanks a lot.

I'll have a look.

--- Post updated at 09:38 PM ---

Ok. I didn't see a link but grabbed it from github.


If you use the archive its simplest. I'm going to call the root path of the directory where you build the library LIBROOT. You should replace this with the actual path.
Code:
gcc -Wall -O3 -o vcf_parser01 vcf.c vcf_parser01.c -I LIBROOT/htslib LIBROOT/libhts.a

should work.
This User Gave Thanks to GRMartin For This Post:
 

9 More Discussions You Might Find Interesting

1. UNIX for Dummies Questions & Answers

links working system wide

I have created symbolic links to several frequently used commands, for example: "lt" is a link to "ls -ltrgo|tail". What can I do to make these links available system-wide, or at least in the directories my coworkers are in most of the time? I have copied the link to several directories, and... (6 Replies)
Discussion started by: jpprial
6 Replies

2. UNIX for Advanced & Expert Users

System wide CDE setup

Does anyone know how to make system wide changes to the CDE's front panel icons? I dont know if it matters but im running Solaris 9. THanks (1 Reply)
Discussion started by: meyersp
1 Replies

3. UNIX for Dummies Questions & Answers

FIND function - system wide

Hi, I have a task to search for a file called 'Xstartup' in the whole system because there might be different versions of it which overrite eachother. Can anyone suggest a smart command to run this search ? The machine needs to scan every single folder beginning from root. Please help, I am... (5 Replies)
Discussion started by: DGoubine
5 Replies

4. Filesystems, Disks and Memory

How to mount/make a FAT system on Linux

Yea i was wondering how i would mount, and create a FAT directory that way i can save files in the FAT directory in a windows system and be able to access them on Linux systems. Or if there is any other way to share files between Linux and Windows. Any responds will help... thanks! (2 Replies)
Discussion started by: kyoist
2 Replies

5. Shell Programming and Scripting

system wide password change

Hello, I am new to shell scripting and I was trying to write a script that would force a system wide password change except for admins. I am having some trouble and any help that someone could give me would be greatly appreciated. I am trying to do it by using the UID as the marker for anyone... (6 Replies)
Discussion started by: kilemark
6 Replies

6. Linux

System wide find and sort

Hi, I need to look for a config file (ldap.conf) and pick the latest modified file. `locate` tells me there are many ldap.conf's, some in /etc, /usr, /home, etc. Is there some way I can sort them by last modified time via bash? I was thinking maybe I could pipe the output of `locate` to `ls... (4 Replies)
Discussion started by: Housni
4 Replies

7. Linux

How to run User-mode Linux installed with synaptic package manager in Ubuntu 10.10

I have installed user-mode linux kernel in Ubuntu 10.10 with the help of Synaptic package manager. But I'm not getting how to run it. If we install it manually, we've to run it using the executable binary file. But here, I'm unable to locate any such file. Please help.... Thanking You.... ... (0 Replies)
Discussion started by: rohitadeshmukh1
0 Replies

8. Red Hat

Changing system-wide for umask

Hi everybody, How can I change the default UMASK for non root users, e.g. I want the umask for every new created user will be 0044. Thanks (6 Replies)
Discussion started by: leo_ultra_leo
6 Replies

9. Shell Programming and Scripting

System-wide search

When looking for wherever a program or a filename appears in the system, a short scrip is "findinner" which another script calls with a long parameter list consisting of path names ending with ".sh" or ".menu". "findinner" looks like this: # If not .savenn file, show name and result of grep. #... (4 Replies)
Discussion started by: wbport
4 Replies
All times are GMT -4. The time now is 12:50 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy