Here is the output ofod -c /path/to/f1. Thank you .
Code:
0000000 I o n C o d e _ 0 4 0 4 0 0 -
0000020 0 0 0 0 - x x x - x x x - x x x
0000040 \n I o n C o d e _ 0 4 0 2 1 1
0000060 - 1 1 1 1 - y y - y y - y y y \n
0000100 R _ 2 0 1 9 _ 0 0 _ 0 0 _ 0 0 _
0000120 0 0 _ 0 0 _ x x x x _ x x 1 - 1
0000140 2 7 - x x x _ x x x _ x x x _ x
0000160 x x _ x x _ x x _ x x \n \n I o n
0000200 C o d e _ 0 4 0 2 2 2 - 2 2 2
0000220 2 - z z - z z z z - z z z \n R _
0000240 2 0 1 9 _ 0 0 _ 0 0 _ 0 0 _ 0 0
0000260 _ 0 0 _ x x x x _ x x 1 - 1 2 6
0000300 - x x x _ x x x _ x x x _ x x x
0000320 _ x x _ x x _ x x \n \n I o n C o
0000340 d e _ 0 4 0 4 1 0 - 0 0 0 0 -
0000360 a a - a a - a a \n I o n C o d e
0000400 _ 0 4 1 2 5 5 - 1 1 1 1 - b b
0000420 - b b b - b b b \n R _ 2 0 1 9 _
0000440 0 0 _ 0 0 _ 0 0 _ 0 0 _ 0 0 _ x
0000460 x x x _ x x 1 - 1 2 0 - x x x _
0000500 x x x _ x x x _ x x x _ x x _ x
0000520 x _ x x \n
Hi,
I am having file which contains around 15 columns, i need to fetch column 3,12,14 based on the condition that column 3 starts with 40464
this is the sample data
how to achieve that (3 Replies)
I’m trying to modify someone perl script to fix a bug. The piece of code checks that the zone name you want to add is unique. However, when the code runs, it finds a partial match using grep, and decides it already exists, so the “create” command exits.
$cstatus = `${ZADM} list -vic | grep... (3 Replies)
Hi, I was trying to figure this out but failed so I hope someone here can help me, thank you in advance.
I have two files.
file1: aa M
bb N
cc O
dd P
ee Q file2: aa A_87_P254063
cc A_87_P016532
bb A_87_P104793
dd A_87_P055331
ee A_87_P059706
aa A_87_P071636
ee A_87_P028302... (2 Replies)
Hi I have a question and hope I can get answer here. Thank you in advance.
I have two files:
file1:
aa X
bb Y
cc Z
file2:
cc A
bb B
dd C
aa D
bb E
If the 1st column match in both file1 and file2, the 2nd column in file2 will be replaced by the 2nd column in file1. If there is no... (2 Replies)
I posted the incorrect files yesterday and apologize. I also modified the awk script but with no luck. There are two text files in the zip (name.txt and output.txt). I am trying to match $2 in name.txt with $1 in output.txt and if they match then $1 of name.txt is copied to $7 of output.txt. ... (7 Replies)
I have a specific set (all ending with .bam) of downloaded files in a directory /home/cmccabe/Desktop/NGS/API/2-15-2016. What I am trying to do is use a match to $2 in name to rename the downloaded files. To make things a more involved the date of the folder is unique and in the header of name... (1 Reply)
Hi All,
I have 100 folders with the first delimiter has a unique name i.e (123_hello and 575_hello) and each folder have atlist 1000 plus files with naming convention i.e (575_hello_1.iso ... 575_hello_1000.iso).
575_hello/575_hello_1.iso
575_hello/575_hello_2.iso
575_hello/575_hello_3.iso... (8 Replies)
Hi, I have a tab delimited text file like this one. I need to do a partial match of a particular cell and then replace matches with an empty cell. So here is a sample:
Smith FordMustang ChevroletCamaro
Miller FordFiesta
Jones KiaSorrento
Davis ChevroletCamaro
Johnson ToyotaHighlander
I... (4 Replies)
I am trying to create a cronjob that will run on startup that will look at a list.txt file to see if there is a later version of a database using database.txt as the source. The matching lines are written to output.
$1 in database.txt will be in list.txt as a partial match. $2 of database.txt... (2 Replies)
In the portion of bash below I am using rename to match the $id variable to $file and when a match (there will alwsys be one) is found then the $id is removed from each bam and bam.bai in $file and _test is added to thee file name before the extension. Each of the variables is set correctly but... (3 Replies)
Discussion started by: cmccabe
3 Replies
LEARN ABOUT CENTOS
rename
RENAME(1) User Commands RENAME(1)NAME
rename - rename files
SYNOPSIS
rename [options] expression replacement file...
DESCRIPTION
rename will rename the specified files by replacing the first occurrence of expression in their name by replacement.
OPTIONS -v, --verbose
Give visual feedback which files where renamed, if any.
-V, --version
Display version information and exit.
-s, --symlink
Peform rename on symlink target
-h, --help
Display help text and exit.
EXAMPLES
Given the files foo1, ..., foo9, foo10, ..., foo278, the commands
rename foo foo0 foo?
rename foo foo0 foo??
will turn them into foo001, ..., foo009, foo010, ..., foo278. And
rename .htm .html *.htm
will fix the extension of your html files.
WARNING
The renaming has no safeguards. If the user has permission to rewrite file names, the command will perform the action without any ques-
tions. For example, the result can be quite drastic when the command is run as root in the /lib directory. Always make a backup before
running the command, unless you truly know what you are doing.
SEE ALSO mmv(1), mv(1)AVAILABILITY
The rename command is part of the util-linux package and is available from ftp://ftp.kernel.org/pub/linux/utils/util-linux/.
util-linux June 2011 RENAME(1)
10-28-2019
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