Sponsored Content
Full Discussion: Duplication | awk | result
Top Forums UNIX for Beginners Questions & Answers Duplication | awk | result Post 303035755 by RudiC on Sunday 2nd of June 2019 09:10:38 AM
Old 06-02-2019
OK, that's what I inferred. How about (the first line will work with a recent shell only)
Code:
if [[ "ALA ARG ASN ASP CYS GLN GLY GLU HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL" =~ $AAA ]]
  then  for i in HS_*.pdb
          do  cat $i | voronota get-balls-from-atoms-file --annotated | \
                  awk -F"[<>]" -vSRCH="$AAA" '$0 ~ SRCH && !OCC[$4]++ {CNT++ } END {print CNT+0}' $i 
          done
  else  echo exit 1
fi
2

 

10 More Discussions You Might Find Interesting

1. Windows & DOS: Issues & Discussions

File Duplication

hi all how to find the file duplication in a windows 2000 server as usual replies are sincerely appreciated. thanks raguram R (3 Replies)
Discussion started by: raguramtgr
3 Replies

2. HP-UX

awk to output cmd result

I was wondering if it was possible to tell awk to print the output of a command in the print. .... | awk '{print $0}' I would like it to print the date right before $0, so something like (this doesn't work though) .... | awk '{print date $0}' (4 Replies)
Discussion started by: IMTheNachoMan
4 Replies

3. UNIX for Advanced & Expert Users

mount LVM duplication drives

Hi, I'm stuck in an awkward situation please help :) I have two identical Seagate 80GB harddrives. My objective is a bit strange. 1.I want to have a cloned disk as bootable backup 2.When booting using the master drive, I also want to mount the cloned backup disk so I can do incremental... (6 Replies)
Discussion started by: onthetopo
6 Replies

4. Shell Programming and Scripting

File Duplication Script?

I have a file, let's say 1.jpg, and I have a text file that contains a list of filenames I would like to duplicate 1.jpg as (i.e., 2.jpg, 3.jpg, 4.jpg, etc.). The filenames that I want to create are all on separate lines, one per line. I'm sure there's a simple solution, but I'm not claiming to... (7 Replies)
Discussion started by: futurestar
7 Replies

5. Shell Programming and Scripting

How to avoid duplication within 2 files?

Hi all, Actually 2 files are there - file1, file2. file1 contains ---> london mosco america russia mosco file2 contains --> europe india japan mosco england london Question is I want to print all the city names without duplication cities in those... (10 Replies)
Discussion started by: balan_mca
10 Replies

6. UNIX for Advanced & Expert Users

File Descriptor redirection and duplication

i have many questions concerning the FD. it was stated that "to redirect Error to output std, you have to write the following code" # ls -alt FileNotThere File > logfile 2>&1 # cat logfile ls: cannot access FileNotThere: No such file or directory -rw-r--r-- 1 root root 0 2010-02-26... (9 Replies)
Discussion started by: ahmad.zuhd
9 Replies

7. Programming

Table Duplication in PHP

Hey, I am making a Facebook like Page system as my first project, So far it's been bate in mind I did it from my 3DS at the same time as my PC gets replaced, So far it's turned out great. Now I am on to creation the blocking system I need to get the code to say If the user already likes the... (0 Replies)
Discussion started by: AimyThomas
0 Replies

8. Linux

De-Duplication Problem

Hi all, I download and install lessfs for deduplication, I copy files in /SharedFiles directory and lessfs work right and not store again copy files, but, when i delete all files in /SharedFiles , not return free space to total space, files not show in /SharedFiles , but not copy new files in... (3 Replies)
Discussion started by: saeedha
3 Replies

9. UNIX for Beginners Questions & Answers

Line duplication with awk?!

So while this seemed totally trivial it turned out to be much more difficult than I had thought. I have a file with 3 rows, and I "just" want to add each field n number of times. E.g. > cat file.txt 0.5 -0.1 0.6 for n=3 into: cat newfile.txt 0.5 0.5 0.5 -0.1 -0.1 -0.1 0.6 0.6 0.6 I... (4 Replies)
Discussion started by: Glorp
4 Replies

10. UNIX for Beginners Questions & Answers

Unexpected result from awk

Hello, Giving those commands: cat > myfile 1 2 3 ^D cat myfile | awk '{ s=s+$1 ; print s}' The output is: 1 3 6 It seems like this command iterates each time on a different row so $1 is the first field of each row.. But what caused it to refer to each row ?. What I mean... (3 Replies)
Discussion started by: uniran
3 Replies
IGAWK(1)							 Utility Commands							  IGAWK(1)

NAME
igawk - gawk with include files SYNOPSIS
igawk [ all gawk options ] -f program-file [ -- ] file ... igawk [ all gawk options ] [ -- ] program-text file ... DESCRIPTION
Igawk is a simple shell script that adds the ability to have ``include files'' to gawk(1). AWK programs for igawk are the same as for gawk, except that, in addition, you may have lines like @include getopt.awk in your program to include the file getopt.awk from either the current directory or one of the other directories in the search path. OPTIONS
See gawk(1) for a full description of the AWK language and the options that gawk supports. EXAMPLES
cat << EOF > test.awk @include getopt.awk BEGIN { while (getopt(ARGC, ARGV, "am:q") != -1) ... } EOF igawk -f test.awk SEE ALSO
gawk(1) Effective AWK Programming, Edition 1.0, published by the Free Software Foundation, 1995. AUTHOR
Arnold Robbins (arnold@skeeve.com). Free Software Foundation Nov 3 1999 IGAWK(1)
All times are GMT -4. The time now is 10:16 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy