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Full Discussion: Outputting characters after a given string and reporting the characters in the row below --sed
Top Forums Shell Programming and Scripting Outputting characters after a given string and reporting the characters in the row below --sed Post 303028728 by nezabudka on Monday 14th of January 2019 04:23:22 AM
Old 01-14-2019
It was interesting to try to implement this algorithm on the sed
Code:
#!/bin/sed -nrf
2~4 h
4~4 {
H;x
s/(.*GCATGAAAACATACA.{3})(.*)/\1\r\2/
}
/\r/ {
:1
s/^.(.{2}[^\r].*)/\1/
T2
s/(\n).(.*)/\1\2/
t1
:2
s/^(.{3}).*/\1/mg
s/(.*)\n(.*)/Codon:\t\1\tQuality Score:\t \2/p
}

Last edited by nezabudka; 01-14-2019 at 09:08 AM..
These 2 Users Gave Thanks to nezabudka For This Post:
Neo Xterra
 

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LEARN ABOUT CENTOS

putws

putws(3C)						   Standard C Library Functions 						 putws(3C)

NAME

       putws - convert a string of Process Code characters to EUC characters

SYNOPSIS

       #include <stdio.h>
       #include <widec.h>

       int putws(wchar_t *s);

DESCRIPTION

       The  putws()  function  converts  the  Process  Code string (terminated by a (wchar_t)NULL) pointed to by s, to an Extended Unix Code (EUC)
       string followed by a NEWLINE character, and writes it to the standard output stream stdout. It does not write the terminal null character.

RETURN VALUES

       The putws() function returns the number of Process Code characters transformed and written.  It returns EOF if it attempts to  write  to  a
       file that has not been opened for writing.

ATTRIBUTES

       See attributes(5) for descriptions of the following attributes:

       +-----------------------------+-----------------------------+
       |      ATTRIBUTE TYPE	     |	    ATTRIBUTE VALUE	   |
       |MT-Level		     |MT-Safe			   |
       +-----------------------------+-----------------------------+

SEE ALSO

       ferror(3C), fopen(3C), fread(3C), getws(3C), printf(3C), putwc(3C), attributes(5)

SunOS 5.10							    22 Apr 1997 							 putws(3C)
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