Awk- Indexing a list of numbers in file2 to print certain rows in file1
Hi
Does anyone know of an efficient way to index a column of data in file2 to print the coresponding row in file1 which corresponds to the data in file2 AND 30 rows preceding and after the row in file1.
For example suppose you have a list of numbers in file2 (single column) as follows:
file1:
I would like all rows in file1 corresponding to the file2 numbers indexed printed AND 30 rows before and after also printed.
Desired output:
Dots signify 30 rows of data preceding and after the targeted rows being printed along with targeted rows indexed in file2
Thanks...
Last edited by Geneanalyst; 10-30-2018 at 01:59 PM..
I am trying to automate a process of searching through a set of files and replace all occurrences of a formatted text with the next item in the list of a second file. Basically i need to replace all instances of T????CLK???? with an IP address from a list in a second file. the second file is one IP... (9 Replies)
Hi all,
Please your help with this.
I have 2 files,
File_1-->contains a column of N numbers
File_2-->contains many lines with other info and numbers from File_1 within it.
I would like to get from File_2 all the lines containing within the same line each of N numbers from File_1... (4 Replies)
File1 row is same as column 2 in file 2.
Also file 2 will either start with A, B or C.
And 3rd column in file 2 is always F2.
When column 2 of file 2 matches file1 column, print all those rows into a separate file.
Here is an example.
file 1:
100
103
104
108
file 2:
... (6 Replies)
I have very limited coding skills but I'm wondering if someone could help me with this. There are many threads about matching strings in two files, but I have no idea how to add a column from one file to another based on a matching string.
I'm looking to match column1 in file1 to the number... (3 Replies)
Hello to all,
I hope somebody could help me with this:
I have this File1 (real has 5 million of lines):
Number Category
--------------- --------------------------------------
8734060355 3
8734060356 ... (6 Replies)
I'm trying to use awk to do the following. I have file1 with many lines, each containing 5 fields describing an individual set. I have file2 which is a template config file with variable space holders to be replaced by the values in file1. I would like to substitute each set of values in file1 with... (6 Replies)
I have a list of IDs in file1 and a list of sequences in file2. I can print sequences from file2, but I'm asking for help in printing the sequences in the same order as the IDs appear in file1.
file1:
EN_comp12952_c0_seq3:367-1668
ES_comp17168_c1_seq6:1-864
EN_comp13395_c3_seq14:231-1088... (5 Replies)
I have 2 file, file1 and file2. file1 has some keys and file2 has keys+some other data. I want to remove the lines from file2,if the key for that line exists in file1.
file1:
key1
key2
flie2:
key1,moredata
key2,moredata
key3,moredata
Required output:
key3,moredata
Thanks
EDIT:... (6 Replies)
I want to print only the lines in file2 that match file1, in the same order as they appear in file 1
file1
file2
desired output:
I'm getting the lines to match
awk 'FNR==NR {a++}; FNR!=NR && a' file1 file2
but they are in sorted order, which is not what I want:
Can anyone... (4 Replies)
I am trying to use awk to find all the $2 values in file2 which is ~30MB and tab-delimited, that are between $2 and $3 in file1 which is ~2GB and tab-delimited.
I have just found out that I need to use $1 and $2 and $3 from file1 and $1 and $2of file2 must match $1 of file1 and be in the range... (6 Replies)
Discussion started by: cmccabe
6 Replies
LEARN ABOUT OPENSOLARIS
comm
comm(1) User Commands comm(1)NAME
comm - select or reject lines common to two files
SYNOPSIS
comm [-123] file1 file2
DESCRIPTION
The comm utility reads file1 and file2, which must be ordered in the current collating sequence, and produces three text columns as output:
lines only in file1; lines only in file2; and lines in both files.
If the input files were ordered according to the collating sequence of the current locale, the lines written will be in the collating
sequence of the original lines. If not, the results are unspecified.
OPTIONS
The following options are supported:
-1 Suppresses the output column of lines unique to file1.
-2 Suppresses the output column of lines unique to file2.
-3 Suppresses the output column of lines duplicated in file1 and file2.
OPERANDS
The following operands are supported:
file1 A path name of the first file to be compared. If file1 is -, the standard input is used.
file2 A path name of the second file to be compared. If file2 is -, the standard input is used.
USAGE
See largefile(5) for the description of the behavior of comm when encountering files greater than or equal to 2 Gbyte ( 2^31 bytes).
EXAMPLES
Example 1 Printing a list of utilities specified by files
If file1, file2, and file3 each contain a sorted list of utilities, the command
example% comm -23 file1 file2 | comm -23 - file3
prints a list of utilities in file1 not specified by either of the other files. The entry:
example% comm -12 file1 file2 | comm -12 - file3
prints a list of utilities specified by all three files. And the entry:
example% comm -12 file2 file3 | comm -23 -file1
prints a list of utilities specified by both file2 and file3, but not specified in file1.
ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables that affect the execution of comm: LANG, LC_ALL, LC_COLLATE,
LC_CTYPE, LC_MESSAGES, and NLSPATH.
EXIT STATUS
The following exit values are returned:
0 All input files were successfully output as specified.
>0 An error occurred.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Availability |SUNWesu |
+-----------------------------+-----------------------------+
|CSI |enabled |
+-----------------------------+-----------------------------+
|Interface Stability |Standard |
+-----------------------------+-----------------------------+
SEE ALSO cmp(1), diff(1), sort(1), uniq(1), attributes(5), environ(5), largefile(5), standards(5)SunOS 5.11 3 Mar 2004 comm(1)