With a little more work, you can do this in awk, without the sort, but:
(noting that PS004,001, not just PS004 counts as $1, as , is not a field separator)
I want to find the top N entries for a certain field based on the values of another field.
For example if N=3, we want the 3 best values for each entry:
Entry1 ||| 100
Entry1 ||| 95
Entry1 ||| 30
Entry1 ||| 80
Entry1 ||| 50
Entry2 ||| 40
Entry2 ||| 20
Entry2 ||| 10
Entry2 ||| 50... (1 Reply)
Hi.
I have a tab separated file that has a couple nearly identical lines. When doing:
sort file | uniq > file.new
It passes through the nearly identical lines because, well, they still are unique.
a)
I want to look only at field x for uniqueness and if the content in field x is the... (1 Reply)
Hi,
Is there any short method to print from a particular field till another filed using awk?
Example File:
File1
====
1|2|acv|vbc|......|100|342
2|3|afg|nhj|.......|100|346
Expected output:
File2
====
acv|vbc|.....|100
afg|nhj|.....|100 (8 Replies)
Hey,
I'm sure this is answered somewhere but my Googling has turned up nothing. I have a file with data in the following format:
<desription of event> at <time and date>The desription of the event is variable length and hence when the list is displayed it is hard to easily see the date (and... (8 Replies)
I have a need to print nth field based on the parameter passed. Suppose I have 3 fields in a file, passing 1 to the function should print 1st field and so on.
I have attempted below function but this throws an error due to incorrect awk syntax.
function calcmaxlen
{
FIELDMAXLEN=0
... (5 Replies)
I would like to print unique lines without sort or unique. Unfortunately the server I am working on does not have sort or unique. I have not been able to contact the administrator of the server to ask him to add it for several weeks. (7 Replies)
I am trying to use awk to print the unique entries in $2
So in the example below there are 3 lines but 2 of the lines match in $2 so only one is used in the output.
File.txt
chr17:29667512-29667673 NF1:exon.1;NF1:exon.2;NF1:exon.38;NF1:exon.4;NF1:exon.46;NF1:exon.47 703.807... (5 Replies)
Trying to print the unique values in $2 before the -, currently the count is displayed. Hopefully, the below is close. Thank you :).
file
chr2:46603668-46603902 EPAS1-902|gc=54.3 253.1
chr2:211471445-211471675 CPS1-1205|gc=48.3 264.7
chr19:15291762-15291983 NOTCH3-1003|gc=68.8 195.8... (3 Replies)
Hello experts,
I am converting a number into its binary output as :
read n
echo "obase=2;$n" | bc
I wish to count the maximum continuous occurrences of the digit 1.
Example :
1. The binary equivalent of 5 = 101. Hence the output must be 1.
2. The binary... (3 Replies)
In the awk below I am trying to print the entire line, along with the header row, if $2 is SNV or MNV or INDEL. If that condition is met or is true, and $3 is less than or equal to 0.05, then in $7 the sub pattern :GMAF= is found and the value after the = sign is checked. If that value is less than... (0 Replies)
Discussion started by: cmccabe
0 Replies
LEARN ABOUT DEBIAN
date::manip::configfile
Date::Manip::ConfigFile(3pm) User Contributed Perl Documentation Date::Manip::ConfigFile(3pm)NAME
Date::Manip::ConfigFile - sample config file
DESCRIPTION
Date::Manip is a highly configurable module. Many of the options can be set in a config file. This document includes a sample config
file.
The config file consists of three sections. The first section is config variables. This is described more fully in the
Date::Manip::Config document.
The second section is the holiday definition section. The third section is the event definition section. These are both described more
fully in the Date::Manip::Holidays document.
SAMPLE CONFIG FILE
The sample config file below works for newer versions of Date::Manip. Some of the config variables may change, or be deprecated, and some
may not work with earlier versions of Date::Manip, so it is strongly suggested that you check out the documentation for the version of
Date::Manip you are using to confirm any of the config variables you want to include.
################################
# CONFIG VARIABLES
################################
# See Date::Manip::Config man page for a description of all
# config variables.
# To include configuration information from additional
# config files:
ConfigFile = /path/to/another/config/file
ConfigFile = /path/to/another/config/file2
# For handling other languages
Language = English
DateFormat = US
Encoding =
# Set the current timezone:
SetDate = now,America/New_York
# Set the work work
WorkWeekBeg = 1
WorkWeekEnd = 5
WorkDay24Hr = 0
WorkDayBeg = 08:00
WorkDayEnd = 17:00
TomorrowFirst = 1
# Misc. variables
YYtoYYYY = 89
FirstDay = 1
Jan1Week1 = 0
Printable = 0
DefaultTime = midnight
RecurRange = none
################################
# HOLIDAYS
################################
# See the Date::Manip::Holidays man page for a description of
# this section.
*HOLIDAYS
# FEDERAL HOLIDAYS
##################
# You can express New Year's Day as the actual day (Jan 1)
# or the observed day (Jan 1 or the nearest week day).
# You can't include BOTH because once a day is marked as
# a holiday, a second definition will treat it the same
# as a weekend and choose another day to assign the holiday
# to (so there would be two days designated as New Years).
# Jan 1 = New Year's Day
1*1:0:1:0:0:0*DWD = New Year's Day (observed)
# Two different ways to defined MLK day
third Monday in Jan = Martin Luther King Jr.'s Birthday
# 1*1:3:1:0:0:0 = Martin Luther King Jr.'s Birthday
# Observed by federal employees in Washington D.C.
# Jan 20 = Inauguration day
third Monday in Feb = Washington's Birthday
last Monday in May = Memorial Day
1st Monday in Sep = Labor Day
second Monday in Oct = Columbus Day
# Jul 4 = Independence Day
1*7:0:4:0:0:0*DWD = Independence Day
# 11/11 = Veterans Day
1*11:0:11:0:0:0*DWD = Veteran's Day
# To define both Thanksgiving and the day after, use the
# following two lines:
fourth Thu in Nov = Thanksgiving
1*11:4:4:0:0:0*FD1 = Day after Thanksgiving
# Dec 25 = Christmas
1*12:0:25:0:0:0*DWD = Christmas
# SAMPLE HOLIDAYS
##################
# You can define a one-time-only holiday by specifying
# the day and year.
6/2/1999 = A special test holiday for 1999
################################
# EVENTS
################################
# See the Date::Manip::Holidays man page for a description of
# this section.
*EVENTS
2000-02-01 = Event01
2000-02-01-12:00:00 = Event02
02-01 = Event03
02-01 12:00:00 = Event04
1*2:0:3:13:00:00 = Event05
2000-02-05 10:00:00 ; 2000-02-05 10:59:59 = Event06
2000-02-05 ; 2000-02-06 = Event07
02-05 ; 02-06 = Event08
2000-02-07 10:00:00 ; 0:0:0:0:3:0:0 = Event09
02-07 10:00:00 ; 0:0:0:0:4:0:0 = Event10
1*2:0:7:10:00:00 ; 0:0:0:0:5:0:0 = Event11
SEE ALSO
Date::Manip - main module documentation
LICENSE
This script is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
AUTHOR
Sullivan Beck (sbeck@cpan.org)
perl v5.14.2 2012-06-02 Date::Manip::ConfigFile(3pm)