Dear Unix Gurus,
I have a sample data set that looks like this
y1 y2 y3 y4 y5
x1 0.3 0.5 2.3 3.1 5.1
x2 1.2 4.1 3.5 1.7 1.2
x3 3.1 2.1 1.0 4.1 2.1
x4 5.0 4.0 6.0 7.0 1.1
I want to open it up so that I get
x1 y1 0.3
x2 y1 1.2
x3 y1 3.1
x4 y1 5.0
x1 y2 0.5
x2 y2... (3 Replies)
I have a huge matrix file containing some 1.5 million rows and 6000 columns. The matrix looks something like this:
1 2 3
4 5 6
7 8 9
3 4 5
I want to add all the numbers in the columns of this matrix and display the result to my stdout. This means that the numbers in the first column are:
... (2 Replies)
Hi All,
I have a huge (and its really huge!) matrix about 400GB in size (2 million rows by 1.5 million columns) . I am trying to optimize its space by creating a sparse representation of it.
Miniature version of the matrix looks like this (matrix.mtx):
3.4543 65.7876 54.564
2.12344... (4 Replies)
Hello to all,
I am very new in the shell scripting and I need help. I have data for several individuals in several rows followed by a tag and by 5 values per row, with the name of the individual in the first column, e.g.:
IND1 H1 12 13 12 15 14
IND2 H2 12 12 15 14 14
IND3 H1 12 15... (2 Replies)
Hi guys,
here https://www.unix.com/shell-programming-scripting/193043-3-column-csv-correlation-matrix-awk-perl.html I found awk script converting
awk '{
OFS = ";"
if (t) {
if (l != $1)
t = t OFS $1
} else t = OFS $1
x = x ? x OFS $NF : $NF
l = $1
}... (2 Replies)
Hi Friends,
I have an input matrix file like this
Col1 Col2 Col3 Col4
R1 1 2 3 4
R2 4 5 6 7
R3 5 6 7 8
I would like to consider only the numeric values without touching the column header and the row header.
I looked up on the forum's search, and I found this. But, I donno how to... (3 Replies)
Hello all,
I am quite new in this but I need some help to keep going with my analysis.
I am struggling with a short script to read a square matrix and convert it in two collumns.
A B C D
A 0.00 0.06 0.51 0.03
B 0.06 0.00 0.72 0.48
C 0.51 0.72 0.00 ... (7 Replies)
How can i convert two columns in to o and 1 matrix. thnks
Input
a c1
b c2
c c1
d c3
e c4
output
c1 c2 c3 c4
a 1 0 0 0
b 0 1 0 0
c 1 0 0 0
d 0 0 ... (5 Replies)
Discussion started by: quincyjones
5 Replies
LEARN ABOUT REDHAT
dlaqps
DLAQPS(l) ) DLAQPS(l)
NAME
DLAQPS - compute a step of QR factorization with column pivoting of a real M-by-N matrix A by using Blas-3
SYNOPSIS
SUBROUTINE DLAQPS( M, N, OFFSET, NB, KB, A, LDA, JPVT, TAU, VN1, VN2, AUXV, F, LDF )
INTEGER KB, LDA, LDF, M, N, NB, OFFSET
INTEGER JPVT( * )
DOUBLE PRECISION A( LDA, * ), AUXV( * ), F( LDF, * ), TAU( * ), VN1( * ), VN2( * )
PURPOSE
DLAQPS computes a step of QR factorization with column pivoting of a real M-by-N matrix A by using Blas-3. It tries to factorize NB columns
from A starting from the row OFFSET+1, and updates all of the matrix with Blas-3 xGEMM.
In some cases, due to catastrophic cancellations, it cannot factorize NB columns. Hence, the actual number of factorized columns is
returned in KB.
Block A(1:OFFSET,1:N) is accordingly pivoted, but not factorized.
ARGUMENTS
M (input) INTEGER
The number of rows of the matrix A. M >= 0.
N (input) INTEGER
The number of columns of the matrix A. N >= 0
OFFSET (input) INTEGER
The number of rows of A that have been factorized in previous steps.
NB (input) INTEGER
The number of columns to factorize.
KB (output) INTEGER
The number of columns actually factorized.
A (input/output) DOUBLE PRECISION array, dimension (LDA,N)
On entry, the M-by-N matrix A. On exit, block A(OFFSET+1:M,1:KB) is the triangular
factor obtained and block A(1:OFFSET,1:N) has been accordingly pivoted, but no factorized. The rest of the matrix, block A(OFF-
SET+1:M,KB+1:N) has been updated.
LDA (input) INTEGER
The leading dimension of the array A. LDA >= max(1,M).
JPVT (input/output) INTEGER array, dimension (N)
JPVT(I) = K <==> Column K of the full matrix A has been permuted into position I in AP.
TAU (output) DOUBLE PRECISION array, dimension (KB)
The scalar factors of the elementary reflectors.
VN1 (input/output) DOUBLE PRECISION array, dimension (N)
The vector with the partial column norms.
VN2 (input/output) DOUBLE PRECISION array, dimension (N)
The vector with the exact column norms.
AUXV (input/output) DOUBLE PRECISION array, dimension (NB)
Auxiliar vector.
F (input/output) DOUBLE PRECISION array, dimension (LDF,NB)
Matrix F' = L*Y'*A.
LDF (input) INTEGER
The leading dimension of the array F. LDF >= max(1,N).
FURTHER DETAILS
Based on contributions by
G. Quintana-Orti, Depto. de Informatica, Universidad Jaime I, Spain
X. Sun, Computer Science Dept., Duke University, USA
LAPACK version 3.0 15 June 2000 DLAQPS(l)