Sponsored Content
Top Forums Shell Programming and Scripting Explanation of FNR in this awk script Post 302944651 by yifangt on Wednesday 20th of May 2015 11:35:46 PM
Old 05-21-2015
Thank Don and Corona!
Realized there was a precedence in the script, and I get it now. I rewrote that part:
Code:
awk '{a[FNR]=(length(a[FNR])?a[FNR]$2$3FS:$2$3FS); print FNR, a[FNR], length(a[FNR])}
END{print "-------------"; for (i =0; i++<FNR;) print i, a[i], length(a[i])}' *.tab

and the output is:
Code:
1 AA  3
2 AA  3
3 CC  3
4 CC  3
1 AA TT  6
2 AA TT  6
3 CC GG  6
4 CC GG  6
1 AA TT BB  9
2 AA TT BB  9
3 CC GG LL  9
4 CC GG LL  9
-------------
1 AA TT BB  9
2 AA TT BB  9
3 CC GG LL  9
4 CC GG LL  9

 

10 More Discussions You Might Find Interesting

1. Shell Programming and Scripting

AWK explanation

Hi, Could anyone please explain why we have arr=1 - what does this statement do? awk -F\; 'FNR==NR{arr=1;next};$3 in arr' core.txt gmrd.txt Any help appreciated (2 Replies)
Discussion started by: penfold
2 Replies

2. Shell Programming and Scripting

Awk: different between NR and FNR

As I know: FNR: The ordinal number of the current record in the current file. NR: The ordinal number of the current record from the start of input. I don't understand really differency between NR and FNR. Who can explain it for me? And give me an example. Thanks (1 Reply)
Discussion started by: anhtt
1 Replies

3. Shell Programming and Scripting

awk NR==FNR compare 2 files produce a 3rd

hi, i have two files, both with 3 columns, the 3rd column has common values between the two files and i want to produce a 3rd file with 4 columns. file 1 a, ,b c file 2 a, b ,d I want to compare the 3rd value and if a match print to file 3 with the 3 columns from the first file... (11 Replies)
Discussion started by: borderblaster
11 Replies

4. Shell Programming and Scripting

error "awk: (FILENAME=- FNR=23) fatal: division by zero attempted"

Hi , I have file : after i run this command : there are error can we print blank line if output error ?? thanks.. ^^ (4 Replies)
Discussion started by: justbow
4 Replies

5. UNIX for Dummies Questions & Answers

Multiple Column print after lookup using NR==FNR (awk)

foo.txt FAMID IID AFF SEX Group AgeCat Dis1 Dis2 Dis3 Dis4 Dis5 Dis6 Dis6 AMD0001 Mayo_49542 1 2 AMD 8 1 1 1 1 1 1 1 AMD0002 Mayo_49606 1 1 AMD 3 1 1 1 1 ... (7 Replies)
Discussion started by: genehunter
7 Replies

6. UNIX for Dummies Questions & Answers

awk NR==FNR output control

Hi Guys, I have two files: f1: A B C D E F G H f2: A X Y Z f1 has 48000 lines, and f2 has 68. I have been matching f1 $3 to f2 $1, and getting f3: A A B C D E F G I would like f3 too look like this: A X Y Z A B C D E F G (2 Replies)
Discussion started by: heecha
2 Replies

7. Shell Programming and Scripting

Awk FNR==NR question

awk -F'' 'FNR==NR {a=$2; next} {$1=a} 1' $useralias ${entries} >> ${entries}_2 Hi, Is there anyway to alter this command so that if it does not find a match it will just leave the line alone instead of replacing what it doesn't find with a blank space? (4 Replies)
Discussion started by: Jazmania
4 Replies

8. Shell Programming and Scripting

Tip: alternative for NR==FNR in awk

Example: $ cat file1 2 3$ cat file2 1 2 3 4 5 6The following awk script works like a charm, NR==FNR is true for file1, the remainder runs for file2: awk ' NR==FNR {A; next} ($1 in A) ' file1 file2 2 3Now have an empty file1: >file1and run the awk script again. The result is empty... (8 Replies)
Discussion started by: MadeInGermany
8 Replies

9. Shell Programming and Scripting

awk --> selective printout with FNR

Hi everybody! need some awk-support. i want a line-selective printout of a file. wat i normally will do with ... awk ' FNR==8' sample.txt But now i need the data from line 8, 10 and the following data from line13 to 250 wich is not end of the file. I tried allready to combine it but without... (2 Replies)
Discussion started by: IMPe
2 Replies

10. Shell Programming and Scripting

Awk: Assigning a variable to be the value of FNR at a certain line

Sorry for the probably strangely worded title but I don't really know how else to put it. Background context: Post processing LAMMPS simulation data. tl;dr: I'm making two spheres collide, every defined timestep the simulation outputs a bunch of data including total energy of the particles,... (10 Replies)
Discussion started by: ThomasP
10 Replies
COMBINE(1)																COMBINE(1)

NAME
combine - combine sets of lines from two files using boolean operations SYNOPSIS
combine file1 and file2 combine file1 not file2 combine file1 or file2 combine file1 xor file2 _ file1 and file2 _ _ file1 not file2 _ _ file1 or file2 _ _ file1 xor file2 _ DESCRIPTION
combine combines the lines in two files. Depending on the boolean operation specified, the contents will be combined in different ways: and Outputs lines that are in file1 if they are also present in file2. not Outputs lines that are in file1 but not in file2. or Outputs lines that are in file1 or file2. xor Outputs lines that are in either file1 or file2, but not in both files. "-" can be specified for either file to read stdin for that file. The input files need not be sorted, and the lines are output in the order they occur in file1 (followed by the order they occur in file2 for the two "or" operations). Bear in mind that this means that the operations are not commutative; "a and b" will not necessarily be the same as "b and a". To obtain commutative behavior sort and uniq the result. Note that this program can be installed as "_" to allow for the syntactic sugar shown in the latter half of the synopsis (similar to the test/[ command). It is not currently installed as "_" by default, but you can alias it to that if you like. SEE ALSO
join(1) AUTHOR
Copyright 2006 by Joey Hess <joey@kitenet.net> Licensed under the GNU GPL. moreutils 2012-04-09 COMBINE(1)
All times are GMT -4. The time now is 10:45 PM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy