I need to read pairs of lines from a file and compare them. We can assume that the number of lines in the file is even. Can i do it in korn shell? (4 Replies)
I have a few lines like --
feature 1,
subfeat 0,
type 3,
subtype 1,
value 0,
--
feature 1,
subfeat 0,
type 1,
subtype 1,
value 0,
I would like to concatenate the... (1 Reply)
Does anyone know a way I can fix my file below where it has lines that are cut?
Just like the (notice the space before ms,c=PH)..
dn: cn=english,ou=Messaging,ou=lang,o=subject,t=j
ms,c=PH
which should be
dn: cn=english,ou=Messaging,ou=lang,o=subject,t=jms,c=PH
The whole text file... (5 Replies)
Hi,
I have a file such as:
---
>contig00001 length=35524 numreads=2944
gACGCCGCGCGCCGCGGCCAGGGCTGGCCCA
CAGGCCGCGCGGCGTCGGCTGGCTGAG
>contig00002 length=4242 numreads=43423
ATGCCGAAGGTCCGCCTGGGGCTGG
CGCCGGGAGCATGTAGCG
---
I would like to concatenate the lines not starting with ">"... (9 Replies)
This seems to be a question whose answer uses sed or awk.
For a file like:
a
b
c
d
e
How to swap the order of the line pairs, to end up with:
b
a
d
c
e
All lines from the original file need to wind up in the output file. (8 Replies)
Hi experts,
e.g.
i/p data looks like
0000xm7zcNDIkP888vRqGv93xA7:176n00qql||9700005405552747,9700005405717924,9700005405733788|unidentified,unidentified,unidentified||
o/p data should like -
row1: 0000xm7zcNDIkP888vRqGv93xA7:176n00qql||9700005405552747|unidentified
... (1 Reply)
I have a file in which the data is stored in pairs of lines. The first line (beginining with ">") is a header, the second line is a sequence.
I would like to sort the file by species name. Desired output for the example file:
I can use
sort -t'_' -k2
to alphabetize headers in the... (1 Reply)
Hi. I'm new to this forum.
I am attempting to parse an Audit Log from Cognos/TM1, selecting only Event IDs of "client" which are found on the "start-tag" record. These Logs are in a pseudo-XML format but not a true XML format. I want to FTP an Audit Log File from the Cognos server to our UNIX... (7 Replies)
I have a file with four columns like
dmn10003t1 PF00001 PF00022 dmn12390t1
dmn10008t1 PF00069 PF00027 dmn9781t1
dmn10008t1 PF00068 PF00027 dmn9781t1
dmn10008t1 PF00069 PF00069 dmn9781t1
dmn12390t1 PF00069 PF00076 dmn10003t1
I want to create a new file by comparing the repeated word pairs... (2 Replies)
Hi,
I would like to batch concatenate files by pairs. I have quite a few of them so I would not like to do that pair by pair separately.
the names of the file is of the type:
file1.fastq
newfile1_new.fastq
file2.fastq
newfile2_new.fastq
and so on...
I would like to concatenate file1... (2 Replies)
Discussion started by: jawad
2 Replies
LEARN ABOUT SUSE
paste
PASTE(1) User Commands PASTE(1)NAME
paste - merge lines of files
SYNOPSIS
paste [OPTION]... [FILE]...
DESCRIPTION
Write lines consisting of the sequentially corresponding lines from each FILE, separated by TABs, to standard output. With no FILE, or
when FILE is -, read standard input.
Mandatory arguments to long options are mandatory for short options too.
-d, --delimiters=LIST
reuse characters from LIST instead of TABs
-s, --serial
paste one file at a time instead of in parallel
--help display this help and exit
--version
output version information and exit
AUTHOR
Written by David M. Ihnat and David MacKenzie.
REPORTING BUGS
Report paste bugs to bug-coreutils@gnu.org
GNU coreutils home page: <http://www.gnu.org/software/coreutils/>
General help using GNU software: <http://www.gnu.org/gethelp/>
COPYRIGHT
Copyright (C) 2009 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law.
SEE ALSO
The full documentation for paste is maintained as a Texinfo manual. If the info and paste programs are properly installed at your site,
the command
info coreutils 'paste invocation'
should give you access to the complete manual.
GNU coreutils 7.1 July 2010 PASTE(1)