|
|
Sponsored Content
Top Forums
Shell Programming and Scripting
Extract specific data content from a long list of data
Post 302378926 by patrick87 on Wednesday 9th of December 2009 05:35:35 AM
12-09-2009
Thanks a lot, ghostdog74.
I get it already
I get it already
|
|
10 More Discussions You Might Find Interesting
1. Shell Programming and Scripting
:confused: I have a tab delimited file that I need to extract data from and into a file with specific field specs. Each field has to be a certain amount of characters. So, the name field (from delimited file) might have only 15 characters but needs to be 25 (in new file) so I need to insert spaces... (5 Replies)
Discussion started by: criddel
5 Replies
2. Shell Programming and Scripting
Hi,
I got a long list of contents:
>sequence_1
ASSSSSSSSSSSDDDDDDDDDDDCCCCCCC
ASDSFDFFDFDFFWERERERERFSDFESFSFD
>sequence_2
ASDFDFDFFDDFFDFDSFDSFDFSDFSDFDSFASDSADSADASD
ASDFFDFDFASFASFASFAFSFFSDASFASFASFAFS
>sequence_3
VEDFGSDGSDGSDGSDGSDGSDGSDG
dDFSDFSDFSDFSDFSDFSDFSDFSDF... (2 Replies)
Discussion started by: patrick87
2 Replies
3. Shell Programming and Scripting
My input:
>seq_1
DSASSTRRARRRRTPRTPSLRSRRSDVTCS
>seq_3
RMRLRRWRKSCSERS*RRSN
>seq_8
RTTGLSERPRLPTTASRSISSRWTR
>seq_10
NELPLEKGSLDSISIE
>seq_9
PNQGDAREPQAHLPRRQGPRDRPLQAYA+
QVQHRRHDHSRTQH*LCRRRQREDCDRLHR
>seq_4
DRGKGQAGCRRPQEGEALVRRCS>seq_6
FA*GLAAQDGEA*SGRG
My output: Extract all... (22 Replies)
Discussion started by: patrick87
22 Replies
4. Shell Programming and Scripting
My input file:
data_5 Ali 422 2.00E-45 102/253 140/253 24
data_3 Abu 202 60.00E-45 12/23 140/23 28
data_1 Ahmad 256 7.00E-45 120/235 140/235 22
data_4 Aman 365 8.00E-45 15/65 140/65 20
data_10 Jones 869 9.00E-45 65/253 140/253 18... (12 Replies)
Discussion started by: patrick87
12 Replies
5. Shell Programming and Scripting
Input file:
#abc_1
SAASFASFGGDSGDSGDSGSDGSDGSDGSDGSDGSDGSDGDS
Output file:
FASFGGDSGDS
I just want to print out the read from position 5 until position 15 from the data.
Below is the code that I just try but it is failed to get my desired output:
grep -v '#' input_file | awk... (5 Replies)
Discussion started by: patrick87
5 Replies
6. Shell Programming and Scripting
Input file 1:
>pattern_5
GAATTCGTTCATGTAGGTTGASDASFGDSGRTYRYGHDGSDFGSDGGDSGSDGSDFGSDF
ATTTAATTATGATTCATACGTCATATGTTATTATTCAATCGTATAAAATTATGTGACCTT
SDFSDGSDFKSDAFLKJASLFJASKLFSJAKJFHASJKFHASJKFHASJKFHSJAKFHAW
>pattern_1
AAGTCTTAAGATATCACCGTCGATTAGGTTTATACAGCTTTTGTGTTATTTAAATTTGAC... (10 Replies)
Discussion started by: patrick87
10 Replies
7. Shell Programming and Scripting
Input:
HS04636 PROGRAM source 836 7001 + ID=g1
HS04636 PROGRAM beginner 836 7001 + ID=g1.t1;Parent=g1
HS04636 PROGRAM position 836 836 + Parent=g1.t1
HS04636 PROGRAM type 836 1017 + Parent=g1.t1
HS04636 ... (2 Replies)
Discussion started by: patrick87
2 Replies
8. HP-UX
Hi Friends,
One question.
Supposed I want to extract data only for process named "sqlplus" how can I do it. Any suggestions?
I don't want all the data as it is not useful to me e.g.. Command I use is given below
extract -xp -p -r repfile -b"03/15/13 7:00 PM" -e"03/15/13 09:30 PM" -f... (1 Reply)
Discussion started by: kunwar
1 Replies
9. Shell Programming and Scripting
Bash scripting beginner here...
I have many folders, each folder representing one subject. Not all subjects have all the required files, so I need to somehow cycle through all the data and then extract the data only from subjects who have no files missing. I tried to output the ls command, but... (4 Replies)
Discussion started by: LeftoverStew
4 Replies
10. Shell Programming and Scripting
data.txt has several information like the below..
<SERVER>:WEB:MYDOM01:/tmp/cong/MYDOM01,/tmp/app/MYDOM01
<WEBER>:CANES:https-web01,https-web02:/web/apps/https-web01/config
<SERVER>:WEB:MYDOM07:/tmp/cong/MYDOM07,/tmp/app/MYDOM07... (7 Replies)
Discussion started by: mohtashims
7 Replies
LEARN ABOUT CENTOS
ppi::statement::data
PPI::Statement::Data(3) User Contributed Perl Documentation PPI::Statement::Data(3) NAME
PPI::Statement::Data - The __DATA__ section of a file SYNOPSIS
# Normal content __DATA__ This: data is: part of: the PPI::Statement::Data: object INHERITANCE
PPI::Statement::Compound isa PPI::Statement isa PPI::Node isa PPI::Element DESCRIPTION
"PPI::Statement::Data" is a utility class designed to hold content in the __DATA__ section of a file. It provides a single statement to hold all of the data. METHODS
"PPI::Statement::Data" has no additional methods beyond the default ones provided by PPI::Statement, PPI::Node and PPI::Element. However, it is expected to gain methods for accessing the data directly, (as a filehandle for example) just as you would access the data in the Perl code itself. TO DO
- Add the methods to read in the data - Add some proper unit testing SUPPORT
See the support section in the main module. AUTHOR
Adam Kennedy <adamk@cpan.org> COPYRIGHT
Copyright 2001 - 2011 Adam Kennedy. This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself. The full text of the license can be found in the LICENSE file included with this module. perl v5.16.3 2011-02-26 PPI::Statement::Data(3)