Hello!
Please, help me to write such script.
I have some text file with name filename.txt
I must check if this file contains string "test-string-first", I must cut from this file string which follows string "keyword-string:" and till first white-space and save it to some variable.
For... (3 Replies)
Hi,
So I'm kinda new to shell scripts and the like. I've picked up quite a bit of use from browsing the forums here but ran into a new one that I can't seem to find an answer for.
I'm looking to parse/find a string AND the next 15 or so charachters that follow the string within a text file... (1 Reply)
I have a text file where I need to find the string = ST*850*
This string is repetaed several times in the file, so I need to know how many times it appears in the file, this is the text files:
ISA*00* *00* *08*925485USNR *ZZ*IMSALADDERSP... (13 Replies)
Hi ,
I have a simple text file with contents as below:
12345678900 971,76 4234560890
22345678900 5971,72 5234560990
32345678900 71,12 6234560190
the new csv-file should be like:
Column1;Column2;Column3;Column4;Column5
123456;78900;971,76;423456;0890... (9 Replies)
I am having a text file which is having more than 200 lines.
EX:
001010122 12000 BIB 12000 11200 1200003
001010122 2000 AND 12000 11200 1200003
001010122 12000 KVB 12000 11200 1200003
In the above file i want to search for string KVB and add/replace... (1 Reply)
Dear All
I am having a text file which is having more than 200 lines.
EX:
001010122 12000 BIB 12000 11200 1200003
001010122 2000 AND 12000 11200 1200003
001010122 12000 KVB 12000 11200 1200003
In the above file i want to search for string KVB... (5 Replies)
I have two files
1. input.txt
2. keyword.txt
input.txt has contents like
.src_ref 0 "call.s" 24 first
0x000000 0x5a80 0x0060 BRA.l 0x60
.src_ref 0 "call.s" 30 first
0x000002 0x1bc5 RETI
.src_ref 0 "call.s" 31 first
0x000003 0x6840 ... (2 Replies)
Hi guys,
I have a text file named file1.txt that is formatted like this:
001 , ID , 20000
002 , Name , Brandon
003 , Phone_Number , 616-234-1999
004 , SSNumber , 234-23-234
005 , Model , Toyota
007 , Engine ,V8
008 , GPS , OFF
and I have file2.txt formatted like this:
... (2 Replies)
Dear all,
I want to find all the "," in my text file and then replace the commas to a tab. I found a script online but I don't know how to modify the script for my case. Any one can help? Thank you.
@echo off &setlocal
set "search=%1"
set "replace=%2"
set "textfile=Input.txt"
set... (2 Replies)
Discussion started by: forevertl
2 Replies
LEARN ABOUT DEBIAN
bio::annotation::target
Bio::Annotation::Target(3pm) User Contributed Perl Documentation Bio::Annotation::Target(3pm)NAME
Bio::Annotation::Target - Provides an object which represents a target (ie, a similarity hit) from one object to something in another
database
SYNOPSIS
$target1 = Bio::Annotation::Target->new(-target_id => 'F321966.1',
-start => 1,
-end => 200,
-strand => 1, # or -1
);
# or
$target2 = Bio::Annotation::Target->new();
$target2->target_id('Q75IM5');
$target2->start(7);
# ... etc ...
# Target is-a Bio::AnnotationI object, can be added to annotation
# collections, e.g. the one on features or seqs
$feat->annotation->add_Annotation('Target', $target2);
DESCRIPTION
Provides an object which represents a target (ie, a similarity hit) from one object to something in another database without prescribing
what is in the other database
AUTHOR - Scott Cain
Scott Cain - cain@cshl.org
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
AnnotationI implementing functions
as_text
Title : as_text
Usage :
Function:
Example :
Returns :
Args :
display_text
Title : display_text
Usage : my $str = $ann->display_text();
Function: returns a string. Unlike as_text(), this method returns a string
formatted as would be expected for te specific implementation.
One can pass a callback as an argument which allows custom text
generation; the callback is passed the current instance and any text
returned
Example :
Returns : a string
Args : [optional] callback
tagname
Title : tagname
Usage : $obj->tagname($newval)
Function: Get/set the tagname for this annotation value.
Setting this is optional. If set, it obviates the need to
provide a tag to Bio::AnnotationCollectionI when adding
this object. When obtaining an AnnotationI object from the
collection, the collection will set the value to the tag
under which it was stored unless the object has a tag
stored already.
Example :
Returns : value of tagname (a scalar)
Args : new value (a scalar, optional)
Specific accessors for Targets
target_id
Usage
$obj->target_id() #get existing value
$obj->target_id($newval) #set new value
Function
Returns
value of target_id (a scalar)
Arguments
new value of target_id (to set)
perl v5.14.2 2012-03-02 Bio::Annotation::Target(3pm)