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Map snps into a ref gene file

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# 8  
Old 01-19-2017
No you have not. None of the data shown in the columns of the output you said you wanted in post #5 and in post #7 (even if the asterisks are removed) in this thread:
Code:
genename   SNPID   chrom   position   txstart   txend

show up anywhere in either of the sample input files shown in post #1 except for the chrom field.

This thread is closed!

Please consider opening a new thread where you show us two small sample input files and show us the exact output that you want your script to produce from those sample input files. Make sure that the data given in those files includes data that tests all of your corner cases and be sure that your description clearly specifies what should happen if multiple values match, what should happen if no values match, what should happen if one value matches, and any special cases that haven't been identified so far by this list.
This User Gave Thanks to Don Cragun For This Post:
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