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09-16-2008
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sorting file based on two or more columns
Hi gang. I'm using a unix/mac system and i'm trying to sort a file (more than 1,000,000 lines). Code:
chr1 100000965 100001001 - chr1 100002155 100002191 + chr1 100002165 100002201 + chr1 100002525 100002561 - chr1 10000364 10000400 - chr1 10000372 10000408 - chr1 10000412 10000448 + chr1 100004742 100004778 - chr1 100004767 100004803 + I want to sort the first column (text and it could be any of 24 chrom) and then sort by 4th column and then by 2nd column. I tried sort command but when i type in sort +3 +1, it doesn't work. |
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