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07-20-2009
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Parsing a file
Hi,
I have a file that looks like this: Code:
>JANE:BOB_JOE.6 ELLEN, Barg c452 5691-6524 YINKHJHJHJGJGHGHGHGHGMNJHJHKJKJHJHJHJHJHJHJHJHJHJHJHJHJ >JANE:BOB_JOE.6 DOOR, Yak c459 5691-6524 REVERSE YINKHJHJHJGJGHGHGHGHGMNJHJHKJKJHJHJHJHJHJHJHJHJHJHJHJHJIIIIIIIIIIIIIIIIIIIIII Basically I only want it to print ELLEN, Barg c452 5691-6524 and DOOR, Yak c459 5691-6524 REVERSE into a seperate file. Phil Last edited by vgersh99; 07-20-2009 at 04:44 PM.. Reason: code tags, PLEASE! |
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07-20-2009
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Code:
sed -n '/^>/s/^>[^ ][^ ]* *\(.*\)/\1/p' myFile > myNewFile ---------- Post updated at 03:44 PM ---------- Previous update was at 03:44 PM ---------- To keep the forums high quality for all users, please take the time to format your posts correctly. First of all, use Code Tags when you post any code or data samples so others can easily read your code. You can easily do this by highlighting your code and then clicking on the # in the editing menu. (You can also type code tags [code] and [/code] by hand.) Second, avoid adding color or different fonts and font size to your posts. Selective use of color to highlight a single word or phrase can be useful at times, but using color, in general, makes the forums harder to read, especially bright colors like red. Third, be careful when you cut-and-paste, edit any odd characters and make sure all links are working property. Thank You. The UNIX and Linux Forums |
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07-20-2009
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Quote:
Code:
awk '/^>/ print {$2,$3,$4,$5,$6}' myfile
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07-20-2009
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And here's a solution in Perl -
Code:
$ $ cat data.txt >JANE:BOB_JOE.6 ELLEN, Barg c452 5691-6524 YINKHJHJHJGJGHGHGHGHGMNJHJHKJKJHJHJHJHJHJHJHJHJHJHJHJHJ >JANE:BOB_JOE.6 DOOR, Yak c459 5691-6524 REVERSE YINKHJHJHJGJGHGHGHGHGMNJHJHKJKJHJHJHJHJHJHJHJHJHJHJHJHJIIIIIIIIIIIIIIIIIIIIII $ $ perl -lne '/^>[^ ]+ (.*)/ && print $1' data.txt ELLEN, Barg c452 5691-6524 DOOR, Yak c459 5691-6524 REVERSE $ |
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