Complex comparison of 3 files


 
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# 1  
Old 09-05-2013
Complex comparison of 3 files

Hello to all in forum,

May you experts could help me with this complex comparison please.

I need to search the numbers in file1 within column3 of file2 and if found, compare column4 to NF
of file2 with the lines in file3. If the column4 to NF in file2 match any of the lines
in file3, then print column2 to NF of file2 and add "C" at the end. If the column4 to NF don't match
any of the lines in file3, print column2 to NF of file2, adding "D" at the end.

file1
Code:
547680
575210
804270
123989
623989
221209

file2
Code:
1|4501892|547680|1|2|30|73491|12|34|1
2|4788930|575210|1|2|30|73472|12|34|1
3|6793773|804270|1|2|30|73420
4|6673724|123989|1|2|30|73001|12|34|1
5|8099821|333722|1|30|73473|10|34|1
6|7889200|623989|1|2|30|73001|12|45|1
7|8882662|221209|1|2|30|83002|12|34|1

file3
Code:
1|2|30|73472|12|34|1
1|2|30|73001|12|34|1
1|2|30|83002|12|34|1

Desired output:
Code:
547680|1|2|30|73491|12|34|1,D
575210|1|2|30|73472|12|34|1,C
804270|1|2|30|73420,D
123989|1|2|30|73001|12|34|1,C
623989|1|2|30|73001|12|45|1,D
221209|1|2|30|83002|12|34|1,C

Thanks in advance for any help.

Last edited by Ophiuchus; 09-05-2013 at 02:43 AM..
# 2  
Old 09-05-2013
Try

Code:
awk -F \| 'f==1{A[$1]++}
f==2 {$1=$2="";B[$7]=$0;}
f==3{if(B[$4]){sub("\\|\\|","",B[$4]);print B[$4]",C";delete B[$4]}}END{for (i in B){if(B[i]){sub("\\|\\|","",B[i]);print B[i]",D"}}}
' OFS=\| f=1 file1 f=2 file2 f=3 file3

575210|1|2|30|73472|12|34|1,C
623989|1|2|30|73001|12|45|1,C
221209|1|2|30|83002|12|34|1,C
804270|1|2|30|73420,D
333722|1|30|73473|10|34|1,D
547680|1|2|30|73491|12|34|1,D

# 3  
Old 09-05-2013
Another version:
Code:
awk '!f{A[$0]; next} {h=$3; $1=$2=$3=x; sub(/\|\|\|/,x)} h in A{print h, $0 "," ($0 in A?"C":"D")}' FS=\| OFS=\| file1 file3 f=1 file2


Last edited by Scrutinizer; 09-05-2013 at 03:39 AM..
# 4  
Old 09-05-2013
Another one

Code:
bash-3.2$ cat f1
547680
575210
804270
123989
623989
221209
bash-3.2$ cat f2
1|4501892|547680|1|2|30|73491|12|34|1
2|4788930|575210|1|2|30|73472|12|34|1
3|6793773|804270|1|2|30|73420
4|6673724|123989|1|2|30|73001|12|34|1
5|8099821|333722|1|30|73473|10|34|1
6|7889200|623989|1|2|30|73001|12|45|1
7|8882662|221209|1|2|30|83002|12|34|1
bash-3.2$ 
bash-3.2$ cat f3
1|2|30|73472|12|34|1
1|2|30|73001|12|34|1
1|2|30|83002|12|34|1
bash-3.2$ 
bash-3.2$ awk 'NR==FNR {  x[$0]++; next; } { m=0; for(i in x) { regexp=gensub(/\|/, "\\\\\\|", "g", i); if(match($0, regexp)) { m++; }} printf "%s", $0; print m ? ",C" : ",D" } ' f3 <(join -t'|' -2 3 f1 f2 | cut -d'|' -f 1,4-)
547680|1|2|30|73491|12|34|1,D
575210|1|2|30|73472|12|34|1,C
804270|1|2|30|73420,D
123989|1|2|30|73001|12|34|1,C
623989|1|2|30|73001|12|45|1,D
221209|1|2|30|83002|12|34|1,C


Last edited by MR.bean; 09-05-2013 at 04:11 AM..
# 5  
Old 09-05-2013
Hello Pamu, Scrutinizer, Mr.Bean

Many thanks! all 3 solution works correctly
# 6  
Old 09-05-2013
awk

Code:
awk -F"[|]" '{
        if(FILENAME=="file1")
                key[$1]=1
        else if(FILENAME=="file3"){
                tail[$0]=1
        }
        else{
                if(key[$3]==1){
					str=$4
                    for(i=5;i<=NF;i++){
						str=sprintf("%s|%s",str,$i)
					}
					if(tail[str]==1)
						print $3"|"str",C"
					else
						print $3"|"str",D"
                }
        }
}' file1 file3 file2

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