Search Results

Search: Posts Made By: narachaid
972
Posted By narachaid
Thank you very much, Don Cragun. It works...
Thank you very much, Don Cragun. It works perfectly.
972
Posted By narachaid
Parse line based on highest value
Hello,

Does anyone know how to parse whole line that has highest value in last column (c12), based on the string in column 6 (column VIRUS)

INPUT:

5 7 4 8 3 VIRUS1 5 5 HUMAN1 8 4 100...
1,710
Posted By narachaid
All clear now, thank you so much!
All clear now, thank you so much!
1,710
Posted By narachaid
Hello Akshay, Thanks for your response. It...
Hello Akshay,
Thanks for your response. It didn't seem to work and gave me this error message: "A[: Event not found." :(
1,710
Posted By narachaid
Filtering data using uniq and sed
Hello,

Does anyone know an easy way to filter this type of file? I want to get everything that has score (column 2) 100.00 and get rid of duplicates (for example gi|332198263|gb|EGK18963.1|...
1,004
Posted By narachaid
Thanks guys!
Thanks guys!
1,004
Posted By narachaid
Hi bartus11, I tried the code, unfortunately...
Hi bartus11,

I tried the code, unfortunately it only extract the first line of the sequence. My sequence is actually much longer than that. For example:
>NAME1 LEN75
100100101001010001010...
1,004
Posted By narachaid
Get string of sequence from other file
Hi guys,

Does anyone know how to get a string of sequence from other file? Should I use awk? Please see below. Thanks!

LIST_FILE:
>NAME1
>NAME3
>NAME5
>NAME7
>NAME8

SEQ_FILE:
>NAME1...
1,484
Posted By narachaid
Parsing a list
Hello,

I have a very long list of file (see input below). I only need the first "chunk" of the line before the space and omit the rest. Also, the > sign needs to be excluded. Can anyone help me...
1,148
Posted By narachaid
Retrieving sequence data from other file
Hello experts :cool:,

I am new to programming and will need your help.. I have 2 very large files with the following format:

FILE1:
>MLP1019 PL4
>MLP7456 PL3
>MLP9268 PL9
>MLP6245 PL1

...
780
Posted By narachaid
Thank you! :)
Thank you! :)
780
Posted By narachaid
Help with editing columns
Hi,

I have large file with 3 columns and want to output the 1st and 2nd column only. However I want the 2nd column to be edited like this: 14.036 to fx14 (notice the number in fx14 comes from the...
2,154
Posted By narachaid
Remove last character in each line
Hi guys,

Does anyone know how to remove the last character in each of the line?

This is what I have:
ABCDE.1
GLSJD.2
HIJPL.2
HKAGB.3
IUBWQ.1

What I want (remove the dot and number):...
1,124
Posted By narachaid
Thank you very much!! :)
Thank you very much!! :)
1,124
Posted By narachaid
Copying first column to be second column
Hi guys,

Does anyone know how to copy the first column and paste it as the second column in a file? :confused:

For example:

Input:
A 1 3
B 3 7
C 5 2
D 9 4

Output:
A A 1 3...
6,442
Posted By narachaid
Viewing XLSB file in Unix
Hello,
Does anyone know how to view an XLSB file in unix?
Thank you.
1,108
Posted By narachaid
Hello, Thank you for the responses. I tried...
Hello, Thank you for the responses.

I tried both of the codes and it gives me this:
(I am showing you a single line, just a very long sequence. File 1 is shown in blue and file 2 is shown in red)...
1,108
Posted By narachaid
How to paste second file into the first file
Hello,

I am new to Unix and hoping that someone could help me with this. I have 2 different text files that has more than 300,000 rows and would like to paste a single column on the File 2 as the...
1,433
Posted By narachaid
Thank you very much guys!
Thank you very much guys!
1,433
Posted By narachaid
How to print lines that only have number lower than...
Hello guys,

I am a beginner in Unix :wall: and was wondering if anyone could help me.

I need a script that prints lines that only has Z-value lower than equals to (<=) 1.0e-02. Each column is...
Showing results 1 to 20 of 20

 
All times are GMT -4. The time now is 09:17 AM.
Unix & Linux Forums Content Copyright 1993-2022. All Rights Reserved.
Privacy Policy