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Search: Posts Made By: manishabh
3,447
Posted By manishabh
Thanks for the code. The only issue is I am...
Thanks for the code. The only issue is I am trying to make the row lengths equal as my column lengths are already equal.
I have tried to modify your code but I still havenot reached the result I...
3,447
Posted By manishabh
Hi Alister, Thanks for your reply. I wanted...
Hi Alister,

Thanks for your reply. I wanted to do exactly what you suggested but after running paste I realized that if we have two files of different row lengths, then this is what it does to it:...
3,447
Posted By manishabh
Make multiple files of equal length
I have 150 files with 4 columns each but variable row lengths that I need to combine by column. I do not have any common column. I want to use "paste " command in unix to do it but before that I have...
31,600
Posted By manishabh
getting an error
Hi,

Thanks for sending me this code. I ran it but I get the error message:

test.sh: line 6: syntax error near unexpected token `done'
test.sh: line 6: `done

what should I do?

thanks...
31,600
Posted By manishabh
find list of files from a list and copy to a directory
I will be very grateful if someone can help me with bash shell script that does the following:

I have a list of filenames:
A01_155716
A05_155780
A07_155812
A09_155844
A11_155876

that are...
3,323
Posted By manishabh
need help with post:extract multiple columns from multiple files
hello,

I will would be grateful if anyone can help me reply to my post

extract multiple cloumns from multiple files; skip rows and include filenames; awk

Please see this thread.
...
8,663
Posted By manishabh
Hi Danmero, Thanks a lot for posting the...
Hi Danmero,

Thanks a lot for posting the code. I apologise for your frustating experience with trying to understand the tables. I ran the code, however it throws an error:

'test1.sh: line 3:...
8,663
Posted By manishabh
re: extract multiple cloumns from multiple files; skip rows and include filenames; aw
Hello,

I am trying to write a bash shell script that does the following:

1.Finds all *.txt files within my directory of interest
2. reads each of the files (25 files) one by one...
8,663
Posted By manishabh
extract multiple cloumns from multiple files; skip rows and include filenames; awk
Hello,

I am trying to write a bash shell script that does the following:

1.Finds all *.txt files within my directory of interest
2. reads each of the files (25 files) one by one...
2,126
Posted By manishabh
re:Tyler
Hi Tyler,

Thanks for the perl one liner. I ran it and it gives me an error:

perl -ne 'chomp; if (/^>/) {s/^>//; print $. != 1 ? "\n":"",$_,"\t"} else {print} END {print "\n"}' data.txt

Can't...
2,126
Posted By manishabh
reformat data with a shell script
Can anyone help me with a shell script that can do the following:

I have a data in fasta format (first line is the header, followed by a sequence of characters).
>ALLLY...
12,118
Posted By manishabh
sed to remove character ['
I have a huge file where the each column has data in the format:

['680.431504394305'] ['P'] . I want to remove the [' and '] from each value. How do I do it with sed?

thanks
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