pc-makegnuplot(1) [debian man page]

PC-MAKEGNUPLOT(1)						  Probcons Manual						 PC-MAKEGNUPLOT(1)

NAME

       pc-makegnuplot - Utility to plot annotation scores.

SYNOPSIS

       pc-makegnuplot [annotscores] [-refscores]

NOTE

       pc-makegnuplot is named makegnuplot in the original sources, but has been remamed to avoid collision with other program names.

SEE ALSO

       pc-compare(1), pc-project(1),from the probcons-extra package, and probcons(1) and probcons-RNA(1) from the probcons package.

REFERENCE

       Please cite Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. PROBCONS: Probabilistic Consistency-based Multiple Sequence
       Alignment. Genome Research 15: 330-340.

AUTHORS

       Chuong Do <chuongdo@cs.stanford.edu>
	   Wrote probcons in collaboration with Michael Brudno in the research group of Serafim Batzoglou, Department of Computer Science,
	   Stanford University.

       Charles Plessy <charles-debian-nospam@plessy.org>
	   Wrote this manpage in DocBook XML for the Debian distribution.

COPYRIGHT

       This program and its manpage are in the public domain.

pc-makegnuplot 1.12						    2007-04-04							 PC-MAKEGNUPLOT(1)

PC-PROJECT(1)							  Probcons Manual						     PC-PROJECT(1)

NAME

       pc-project - Program to project multiple alignment to pairwise alignments.

SYNOPSIS

       pc-project [ALIGNMENT] [-nocompressgaps]

NOTE

       pc-project is named project in the original sources, but has been remamed to avoid collision with other program names.

SEE ALSO

       pc-makegnufile(1), pc-compare(1),from the probcons-extra package, and probcons(1) and probcons-RNA(1) from the probcons package.

REFERENCE

       Please cite Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. PROBCONS: Probabilistic Consistency-based Multiple Sequence
       Alignment. Genome Research 15: 330-340.

AUTHORS

       Chuong Do <chuongdo@cs.stanford.edu>
	   Wrote probcons in collaboration with Michael Brudno in the research group of Serafim Batzoglou, Department of Computer Science,
	   Stanford University.

       Charles Plessy <charles-debian-nospam@plessy.org>
	   Wrote this manpage in DocBook XML for the Debian distribution.

COPYRIGHT

       This program and its manpage are in the public domain.

pc-project 1.12 						    2007-04-04							     PC-PROJECT(1)