cmtk-convert_warp(1) [debian man page]
convert_warp(1) The Computational Morphometry Toolkit convert_warp(1) NAME
convert_warp - Convert nonrigd transformations. SYNOPSIS
convert_warp InputPath OutputPath DESCRIPTION
This tool converts nonrigid BB-spline free-format deformation coordinate transformations between different representations (e.g., absolute vs. relative vectors). Also creates fractional transformations. OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --fractional <float>, -f <float> Write fractional deformation. Range: 0=affine to 1=full nonrigid; Default: 1 [Default: -1] --deformation-only, -d Write only deformation part of transformation (minus global affine component) AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff LICENSE
http://www.fsf.org/licensing/licenses/gpl.html BUGS
Report bugs at http://nitrc.org/projects/cmtk/ ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 convert_warp(1)
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fit_affine_xform_landmarks(1) The Computational Morphometry Toolkit fit_affine_xform_landmarks(1) NAME
fit_affine_xform_landmarks - Fit Affine Transformation to Landmarks SYNOPSIS
fit_affine_xform_landmarks SourcePath TargetPath OutputXform DESCRIPTION
Fit a linear affine transformation to a set of matched landmarks. OPTIONS
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --rigid Fit only a rigid, 6 degree-of-freedom transformation rather than full affine. This requires fewer landmarks and makes less trict assumptions about their location (i.e., three non-collinear landmarks are sufficient to obtain a rigid transformation. AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, and Daniel B. Russakoff LICENSE
http://www.fsf.org/licensing/licenses/gpl.html BUGS
Report bugs at http://nitrc.org/projects/cmtk/ ACKNOWLEDGMENTS
From April 2009 through September 2011, CMTK Development and Maintenance was supported by the National Institute of Biomedical Imaging and Bioengineering under Grant No.R01 EB008381 (PI: Torsten Rohlfing). CMTK 2.2.2 Jul 20 2012 fit_affine_xform_landmarks(1)