CARET(1)CARET(1)NAME
caret - interactive viewing, manipulation and analysis of surface reconstructions of the cerebral and cerebellar cortex
DESCRIPTION
Caret is a software application for viewing and manipulating surface reconstructions of the cerebral and cerebellar cortex, viewing vol-
umes, for displaying experimental data on the surfaces and volumes and performing functional and structural analysis of the cerebral cor-
tex.
Besides the main GUI application, the Caret software package provides a command line interface caret_command that significantly improves
the efficiency when analyzing a large number of datasets.
caret_command provides an extensive help output when called with the -help option.
Questions regarding the usage of Caret or related theory can be posted on the Caret mailing list (see http://brain-
vis.wustl.edu/caret/#Help).
SEE ALSO
The Caret homepage at http://brainvis.wustl.edu/caret which provides extensive documentation, including tutorials and demo datasets.
AUTHOR
Caret was written by John Harwell, Heather Drury, Donna Hanlon and David Van Essen; Washington University School of Medicine
This manual page was written by Michael Hanke <michael.hanke@gmail.com>, for the Debian project (but may be used by others).
Michael Hanke December 2007 CARET(1)
Check Out this Related Man Page
ITKSNAP(1) User Commands ITKSNAP(1)NAME
itksnap - semi-automatic segmentation of structures in 3D images
SYNOPSIS
itksnap [options] [grey_image]
DESCRIPTION
SNAP provides semi-automatic segmentation of structures in medical images (e.g. magnetic resonance images of the brain) using active con-
tour methods, as well as manual delineation and image navigation. Noteworthy features are:
* Linked cursor for seamless 3D navigation
* Manual segmentation in three orthogonal planes at once
* Support for many different 3D image formats, including NIfTI
* Support for concurrent, linked viewing and segmentation of multiple images
* Limited support for color images (e.g., diffusion tensor maps)
* 3D cut-plane tool for fast post-processing of segmentation results
OPTIONS --grey, -g FILE
Load greyscale image FILE (optional)
--segmentation, -s FILE
Load segmentation image FILE
--labels, -l FILE
Load label description file FILE
--rgb FILE
Load RGB image FILE (as overlay if combined with -g)
AUTHOR
ITK-SNAP was written by Paul A. Yushkevichi, Hui Zhang, Casey Goodlett, Timothy Burke, Nicholas Tustison, Guido Gerig, Silvio Turello,
Joachim Schlegel, Gabor Szekely, Chris Wynn, Arun Neelamkavil, David Gregg, Eric Larsen, Sanjay Sthapit, Sean Ho, Ashraf Farrag, Amy Hen-
derson, Robin Munesato, Ming Yu, Nathan Moon, Thorsten Scheuermann, Konstantin Bobkov, Nathan Talbert, Yongjik Kim, Pierre Fillard, Daniel
S. Fritsch, Stephen R. Aylward
This manual page was written by Michael Hanke <michael.hanke@gmail.com>, for the Debian project (but may be used by others).
SEE ALSO
Manual and tutorial: http://itksnap.org
Michael Hanke April 2010 ITKSNAP(1)