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kan dette blevet løst med awk og sed?
Hi Masters,
Code:
___________________________________________________________________________________
Group of orthologs #1. Best score 3010 bits
Score difference with first non-orthologous sequence - yeast:3010 human:2754
YHR165C 100.00% PRP8_HUMAN 100.00%
___________________________________________________________________________________
Group of orthologs #2. Best score 2100 bits
Score difference with first non-orthologous sequence - yeast:2033 human:1978
YLR106C 100.00% MDN1_HUMAN 100.00%
___________________________________________________________________________________
Group of orthologs #3. Best score 2082 bits
Score difference with first non-orthologous sequence - yeast:997 human:593
YJL130C 100.00% PYR1_HUMAN 100.00%
___________________________________________________________________________________
Group of orthologs #4. Best score 1959 bits
Score difference with first non-orthologous sequence - yeast:1959 human:1007
YKR054C 100.00% DYHC_HUMAN 100.00%
___________________________________________________________________________________
Group of orthologs #5. Best score 1855 bits
Score difference with first non-orthologous sequence - yeast:1855 human:1022
YNR016C 100.00% Q6KE87_HUMAN 100.00%
YMR207C 19.86% COA2_HUMAN 90.52%
COA1_HUMAN 53.30%
___________________________________________________________________________________
Group of orthologs #6. Best score 1838 bits
Score difference with first non-orthologous sequence - yeast:1748 human:1767
YDL140C 100.00% RPB1_HUMAN 100.00%
___________________________________________________________________________________
Group of orthologs #7. Best score 1768 bits
Score difference with first non-orthologous sequence - yeast:1768 human:1636
YJR066W 100.00% Q4LE76_HUMAN 100.00%
YKL203C 49.22%
Disse registre er en del af en fil. Hvad jeg skal gøre, er at udtrække oplysninger fra denne fil, og sætte dem ind i en speadsheet format, som dette: (eksempler fra # 5 og # 7 ovenfor)
Group_number; Best_Score; S_one; P_one; S_two; P_two
5; 1855; YNR016C; 100,00%; Q6KE87_HUMAN; 100,00%
5; 1855; YMR207C; 19,86%; COA2_HUMAN; 90,52%
5; 1855;;; COA1_HUMAN; 53,30%
7; 1768; YJR066W; 100,00%; Q4LE76_HUMAN; 100,00%
7; 1768; YKL203C; 49%;;
Thanks in advance!
Sidst redigeret af Perderabo; 11-08-2005 på 11:41 AM.. Årsag: Tilføj kode tags og deaktiver smilies til læsbarheden
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11-07-2005
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