I'm new of UNIX shell scripting. I'm recently generating a excel report in UNIX(file with delimiter is fine). How should I make a script to do it?
1 file to join comes from output of one UNIX command, the second from another UNIX command, and third from a database query. The key columes of all... (7 Replies)
Hi,
I'm trying to compare the first column of two files (tab or whitespace delimited, either way's fine, I`ve got both) and print the lines that are identical for the first column of both files. Something like this:
File1
AAA 26 49 7 27 36 33 46 75 73 69
AAAAA 4 10 4 7 10 18 21... (2 Replies)
Hi all,
I searched through the forum but i can't manage to find a solution. I need to join a set of files placed in a directory (~1600) by column, and obtain an output with first and second column common to each file, but following columns are taken from the file in the list (precisely the fourth... (10 Replies)
I have n files (for ex:64 files) with one similar column. Is it possible to combine them all based on that column ?
file1
ax100 20 30 40
ax200 22 33 44
file2
ax100 10 20 40
ax200 12 13 44
file2
ax100 0 0 4
ax200 2 3 4 (9 Replies)
Dear Forum,
Full title of the topic would be: "Join 3 or more files using matching column without full list in any of these columns"
I have several, typically 3 or 4 files which I need to join, something like FULL JOIN in slq scripts, all combinations of matches should be printed into an... (3 Replies)
Hi All,
I am trying to join to files based on one common column.
Cat File1
ID HID
Ab_1 23
Cd 45
df 22
Vv 33
Cat File2
ID pval
Ab_1 0.3
Cd 10
Vv 0.0444 (3 Replies)
Hi,
I have 20 tab delimited text files that have a common column (column 1). The files are named GSM1.txt through GSM20.txt. Each file has 3 columns (2 other columns in addition to the first common column).
I want to write a script to join the files by the first common column so that in the... (5 Replies)
Hi all,
I'm trying to join two .txt file tab delimitated based on a common column.
File 1
transcript_id gene_id length effective_length expected_count TPM FPKM IsoPct
comp1000201_c0_seq1 comp1000201_c0 337 183.51 0.00 0.00 0.00 0.00
comp1000297_c0_seq1 ... (1 Reply)
Dear All,
I have many files formatted like this:
file1.txt:
1/2-SBSRNA4 18
A1BG 3
A1BG-AS1 6
A1CF 0
A2LD1 1
A2M 1160
file2.txt
1/2-SBSRNA4 53
A1BG 1
A1BG-AS1 7
A1CF 0
A2LD1 3
A2M 2780 (5 Replies)
Discussion started by: paolo.kunder
5 Replies
LEARN ABOUT HPUX
comm
comm(1) General Commands Manual comm(1)NAME
comm - select or reject lines common to two sorted files
SYNOPSIS
file1 file2
DESCRIPTION
comm reads file1 and file2, which should be ordered in increasing collating sequence (see sort(1) and Environment Variables below), and
produces a three-column output:
Column 1: Lines that appear only in file1,
Column 2: Lines that appear only in file2,
Column 3: Lines that appear in both files.
If is used for file1 or file2, the standard input is used.
Options 1, 2, or 3 suppress printing of the corresponding column. Thus prints only the lines common to the two files; prints only lines in
the first file but not in the second; does nothing useful.
EXTERNAL INFLUENCES
Environment Variables
determines the collating sequence expects from the input files.
determines the language in which messages are displayed.
If is not specified in the environment or is set to the empty string, the value of determines the language in which messages are displayed.
If is not specified in the environment or is set to the empty string, the value of is used as a default. If is not specified or is set to
the empty string, a default of ``C'' (see lang(5)) is used instead of If any internationalization variable contains an invalid setting,
behaves as if all internationalization variables are set to ``C''. See environ(5).
International Code Set Support
Single- and multi-byte character code sets are supported.
EXAMPLES
The following examples assume that and have been ordered in the collating sequence defined by the or environment variable.
Print all lines common to and (in other words, print column 3):
Print all lines that appear in but not in (in other words, print column 1):
Print all lines that appear in but not in (in other words, print column 2):
SEE ALSO cmp(1), diff(1), sdiff(1), sort(1), uniq(1).
STANDARDS CONFORMANCE comm(1)