Thanks Man!! It worked like a rocket..perfect..!!
Made few changes to script i.e. added sort -t ';' -k6 {to sort the common identifier in order means alarm then corresponding clearAlarm else alarm and corresponding ClearAlarm are most of the times far in file, not next line}
How this script would react if a alarm is not clear i.e it does not have a clearAlarm event? What has to be modified in it..
hi,
i am getting this error while executing the script with cron:-
COMMON_ROOT=/files/common: is not an identifier
Manual run is ok, not getting any error. (2 Replies)
I use sed and awk. I am not a big expert but to some extent. I have file like this
PFA0165c ctg_6843
PFA0335w ctg_6843 ctg_6871 ctg_6977 ctg_6654 ctg_7052 ctg_6899 ctg_6840 ctg_7202 ctg_6638
PFA0155c ctg_6877 ctg_7169 ctg_7179 ctg_6843 ctg_6871
Now I want output like... (6 Replies)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 3rd column.(tab separated columns)
Sample input:
file1:
111 222 0.1
333 444 0.5
555 666 0.4
file 2:
111 222 0.7
555 666... (5 Replies)
Hi all,
This should be very easy but I can't figure it out...
I have a file that looks like this:
@SRR057408.1 FW8Y5CK02R652T length=34
AGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT
+SRR057408.1 FW8Y5CK02R652T length=34
FIIHFF6666?=:88@@@BBD:::?@ABBAAA>8
@SRR057408.2 FW8Y5CK02TBMHV length=52... (1 Reply)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 5th column.(tab separated columns) . 3rd and 4th columns corresponds to the row which has highest value for the 5th column.
Sample... (2 Replies)
Hi
I have 2 files with following data
First file,
sp|Q676U5|A16L1_HUMAN,
Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2,
Maximum coiled-coil residue probability: 0.657 in position 163.
Maximum dimeric residue probability: 0.288 in position 163.
... (1 Reply)
Hi,
I have a table to be imported for R as matrix or data.frame but I first need to edit it because I've got several lines with the same identifier (1st column), so I want to sum the each column (2nd -nth) of each identifier (1st column)
The input is for example, after sorted:
K00001 1 1 4 3... (8 Replies)
Hi All,
i have below two files.
FILE:
NAME="/dev/sda" TYPE="disk" SIZE="60G" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="" MOUNTPOINT=""
NAME="/dev/sda1" TYPE="part" SIZE="500M" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="/dev/sda" MOUNTPOINT="/boot"
NAME="/dev/sda2"... (3 Replies)
Discussion started by: balu1234
3 Replies
LEARN ABOUT OPENSOLARIS
alarm
alarm(2) System Calls alarm(2)NAME
alarm - schedule an alarm signal
SYNOPSIS
#include <unistd.h>
unsigned int alarm(unsigned int seconds);
DESCRIPTION
The alarm() function causes the system to generate a SIGALRM signal for the process after the number of real-time seconds specified by sec-
onds have elapsed (see signal.h(3HEAD)). Processor scheduling delays may prevent the process from handling the signal as soon as it is
generated.
If seconds is 0, a pending alarm request, if any, is cancelled. If seconds is greater than LONG_MAX/hz, seconds is rounded down to
LONG_MAX/hz. The value of hz is normally 100.
Alarm requests are not stacked; only one SIGALRM generation can be scheduled in this manner; if the SIGALRM signal has not yet been gen-
erated, the call will result in rescheduling the time at which the SIGALRM signal will be generated.
The fork(2) function clears pending alarms in the child process. A new process image created by one of the exec(2) functions inherits the
time left to an alarm signal in the old process's image.
RETURN VALUES
If there is a previous alarm request with time remaining, alarm() returns a non-zero value that is the number of seconds until the
previous request would have generated a SIGALRM signal. Otherwise, alarm() returns 0.
ERRORS
The alarm() function is always successful; no return value is reserved to indicate an error.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Interface Stability |Standard |
+-----------------------------+-----------------------------+
|MT-Level |Async-Signal-Safe |
+-----------------------------+-----------------------------+
SEE ALSO exec(2), fork(2), signal.h(3HEAD), attributes(5), standards(5)SunOS 5.11 6 Jun 2007 alarm(2)