hi,
i am getting this error while executing the script with cron:-
COMMON_ROOT=/files/common: is not an identifier
Manual run is ok, not getting any error. (2 Replies)
I use sed and awk. I am not a big expert but to some extent. I have file like this
PFA0165c ctg_6843
PFA0335w ctg_6843 ctg_6871 ctg_6977 ctg_6654 ctg_7052 ctg_6899 ctg_6840 ctg_7202 ctg_6638
PFA0155c ctg_6877 ctg_7169 ctg_7179 ctg_6843 ctg_6871
Now I want output like... (6 Replies)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 3rd column.(tab separated columns)
Sample input:
file1:
111 222 0.1
333 444 0.5
555 666 0.4
file 2:
111 222 0.7
555 666... (5 Replies)
Hi all,
This should be very easy but I can't figure it out...
I have a file that looks like this:
@SRR057408.1 FW8Y5CK02R652T length=34
AGCAGTGGTATCAACGCAGAGTAAGCAGTGGTAT
+SRR057408.1 FW8Y5CK02R652T length=34
FIIHFF6666?=:88@@@BBD:::?@ABBAAA>8
@SRR057408.2 FW8Y5CK02TBMHV length=52... (1 Reply)
Hello guys,
I need a script to get the common lines from two files with a criteria that if the first two columns match then I keep the maximum value of the 5th column.(tab separated columns) . 3rd and 4th columns corresponds to the row which has highest value for the 5th column.
Sample... (2 Replies)
Hi
I have 2 files with following data
First file,
sp|Q676U5|A16L1_HUMAN,
Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2,
Maximum coiled-coil residue probability: 0.657 in position 163.
Maximum dimeric residue probability: 0.288 in position 163.
... (1 Reply)
Hi,
I have a table to be imported for R as matrix or data.frame but I first need to edit it because I've got several lines with the same identifier (1st column), so I want to sum the each column (2nd -nth) of each identifier (1st column)
The input is for example, after sorted:
K00001 1 1 4 3... (8 Replies)
Hi All,
i have below two files.
FILE:
NAME="/dev/sda" TYPE="disk" SIZE="60G" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="" MOUNTPOINT=""
NAME="/dev/sda1" TYPE="part" SIZE="500M" OWNER="root" GROUP="disk" MODE="brw-rw----" PKNAME="/dev/sda" MOUNTPOINT="/boot"
NAME="/dev/sda2"... (3 Replies)
Discussion started by: balu1234
3 Replies
LEARN ABOUT SUNOS
split
split(1) User Commands split(1)NAME
split - split a file into pieces
SYNOPSIS
split [-linecount | -l linecount] [-a suffixlength] [ file [name]]
split [ -b n | nk | nm] [-a suffixlength] [ file [name]]
DESCRIPTION
The split utility reads file and writes it in linecount-line pieces into a set of output-files. The name of the first output-file is name
with aa appended, and so on lexicographically, up to zz (a maximum of 676 files). The maximum length of name is 2 characters less than the
maximum filename length allowed by the filesystem. See statvfs(2). If no output name is given, x is used as the default (output-files will
be called xaa, xab, and so forth).
OPTIONS
The following options are supported:
-linecount | -l linecounNumber of lines in each piece. Defaults to 1000 lines.
-a suffixlength Uses suffixlength letters to form the suffix portion of the filenames of the split file. If -a is not specified,
the default suffix length is 2. If the sum of the name operand and the suffixlength option-argument would create a
filename exceeding NAME_MAX bytes, an error will result; split will exit with a diagnostic message and no files
will be created.
-b n Splits a file into pieces n bytes in size.
-b nk Splits a file into pieces n*1024 bytes in size.
-b nm Splits a file into pieces n*1048576 bytes in size.
OPERANDS
The following operands are supported:
file The path name of the ordinary file to be split. If no input file is given or file is -, the standard input will be used.
name The prefix to be used for each of the files resulting from the split operation. If no name argument is given, x will be used as
the prefix of the output files. The combined length of the basename of prefix and suffixlength cannot exceed NAME_MAX bytes. See
OPTIONS.
USAGE
See largefile(5) for the description of the behavior of split when encountering files greater than or equal to 2 Gbyte ( 2**31 bytes).
ENVIRONMENT VARIABLES
See environ(5) for descriptions of the following environment variables that affect the execution of split: LANG, LC_ALL, LC_CTYPE, LC_MES-
SAGES, and NLSPATH.
EXIT STATUS
The following exit values are returned:
0 Successful completion.
>0 An error occurred.
ATTRIBUTES
See attributes(5) for descriptions of the following attributes:
+-----------------------------+-----------------------------+
| ATTRIBUTE TYPE | ATTRIBUTE VALUE |
+-----------------------------+-----------------------------+
|Availability |SUNWesu |
+-----------------------------+-----------------------------+
|CSI |enabled |
+-----------------------------+-----------------------------+
|Interface Stability |Standard |
+-----------------------------+-----------------------------+
SEE ALSO csplit(1), statvfs(2), attributes(5), environ(5), largefile(5), standards(5)SunOS 5.10 16 Apr 1999 split(1)