I have a file with which i must remove the last line of the file (the footer). I know how to copy and redirect with tail -1 etc, but how do i delete it permanentely (4 Replies)
I must remove hex characters 0A and 0D from several fields within an MS Access Table. Since I don't think it can be done in Access, I am trying here.
I am exporting a Table from Access (must be fixed length fields, I think, for my idea to work here) into a text format.
I then want to run a... (2 Replies)
hello experts,
I have a file: File1 Sample Test1
This is a Test
Sample Test2
Another Test
Final Test3
A final Test
I can use sed to delete the line with specific text
ie: sed '/Test2/d' File1.txt > File2.txt
How can I delete the line with the matching text and the line immediately... (6 Replies)
My data is xml'ish (here is an excerpt) :-
<bag name="mybag1" version="1.0"/>
<contents id="coins"/>
<bag name="mybag2" version="1.1"/>
<contents id="clothes"/>
<contents id="shoes"/>
<bag name="mybag3" version="1.6"/>
I want to delete line containing mybag2 and its subsequent... (5 Replies)
I'm a biologist trying to analyse some data and I'll appreciate some help with the following problem. I have a column of characters which I'll like to delete the duplicated characters in each line and report only the unique one.No sorting should be done. E.g.
The original data:
GTG
CTC
CTC... (5 Replies)
Hi,
I have a file with about 25 colums separated with '~', but few of the lines have extra tabs ('^') and new line characters ('$'). Is there a way I can delete those characters if they are anywhere before the 25th column in a line?
example:
CLUB000650;12345678;0087788667;NOOP MEMBER ... (4 Replies)
Hi,
I have a file that has data in the following manner,
tt_0.00001.dat 123.000
tt_0.00002.dat 124.000
tt_0.00002.dat 125.000
This is consistent for all the entries in the file. I want to delete the 'tt_' and '.dat' from each line. Could anyone please guide me how to do this using awk or... (2 Replies)
hi,
./R1_970330_210505.sard
./R1_970403_223412.sard
./R1_970626_115235.sard
./R1_970626_214344.sard
./R1_970716_234214.sard
...
...
...
for these strings, i wanna remove the ./ for each line
how can i do that?
i know it could possibly be done by sed, but i really have not idea how... (4 Replies)
Hi,
I have a text file with some lines like this:
/MEDIA/DISK1/23568742.MOV
/MEDIA/DISK1/87456321.AVI
/MEDIA/DISK2/PART1/45753131.AVI
/IMPORT/44452.WAV
...
I want to remove the last 12 characters in each line that it ends "AVI". Should look like this:
/MEDIA/DISK1/23568742.MOV... (12 Replies)
Discussion started by: inaki
12 Replies
LEARN ABOUT DEBIAN
ace::sequence::gene
Ace::Sequence::Gene(3pm) User Contributed Perl Documentation Ace::Sequence::Gene(3pm)NAME
Ace::Sequence::Gene - Simple "Gene" Object
SYNOPSIS
# open database connection and get an Ace::Object sequence
use Ace::Sequence;
# get a megabase from the middle of chromosome I
$seq = Ace::Sequence->new(-name => 'CHROMOSOME_I,
-db => $db,
-offset => 3_000_000,
-length => 1_000_000);
# get all the genes
@genes = $seq->genes;
# get the exons from the first one
@exons = $genes[0]->exons;
# get the introns
@introns = $genes[0]->introns
# get the CDSs (NOT IMPLEMENTED YET!)
@cds = $genes[0]->cds;
DESCRIPTION
Ace::Sequence::Gene is a subclass of Ace::Sequence::Feature. It inherits all the methods of Ace::Sequence::Feature, but adds the ability
to retrieve the annotated introns and exons of the gene.
OBJECT CREATION
You will not ordinarily create an Ace::Sequence::Gene object directly. Instead, objects will be created in response to a genes() call to
an Ace::Sequence object.
OBJECT METHODS
Most methods are inherited from Ace::Sequence::Feature. The following methods are also supported:
exons()
@exons = $gene->exons;
Return a list of Ace::Sequence::Feature objects corresponding to annotated exons.
introns()
@introns = $gene->introns;
Return a list of Ace::Sequence::Feature objects corresponding to annotated introns.
cds()
@cds = $gene->cds;
Return a list of Ace::Sequence::Feature objects corresponding to coding sequence. THIS IS NOT YET IMPLEMENTED.
relative()
$relative = $gene->relative;
$gene->relative(1);
This turns on and off relative coordinates. By default, the exons and intron features will be returned in the coordinate system used
by the gene. If relative() is set to a true value, then coordinates will be expressed as relative to the start of the gene. The first
exon will (usually) be 1.
SEE ALSO
Ace, Ace::Object, Ace::Sequence,Ace::Sequence::Homol, Ace::Sequence::Feature, Ace::Sequence::FeatureList, GFF
AUTHOR
Lincoln Stein <lstein@cshl.org> with extensive help from Jean Thierry-Mieg <mieg@kaa.crbm.cnrs-mop.fr>
Copyright (c) 1999, Lincoln D. Stein
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for
disclaimers of warranty.
POD ERRORS
Hey! The above document had some coding errors, which are explained below:
Around line 148:
You forgot a '=back' before '=head1'
perl v5.14.2 2001-02-18 Ace::Sequence::Gene(3pm)