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Top Forums UNIX for Dummies Questions & Answers How to delete text between two characters in line? Post 302774787 by euspilapteryx on Sunday 3rd of March 2013 09:45:24 AM
Old 03-03-2013
How to delete text between two characters in line?

Hi,

I have a large text file with the following format:

>gi|347545744|gb|JN204951.1| Dismorphia spio voucher 5
ATCAAATTCCTTCCTCTCCTTAAA
>gi|17544664774|gb|WN204922.32| Rodapara nigens gene region
CCGGGCAAATTCCTTCCTCTCCTTAAA
>gi|555466400|gb|SG255122.8| Bombyx mandariana genbank 3
CCGGGCAAATTCCTTCCTCTCCTTAAA

in each line, I would like the text between the ">" and the first space deleted. The text should be outputted like:

>Dismorphia spio voucher 5
ATCAAATTCCTTCCTCTCCTTAAA
>Rodapara nigens gene region
CCGGGCAAATTCCTTCCTCTCCTTAAA
>Bombyx mandariana genbank 3
CCGGGCAAATTCCTTCCTCTCCTTAAA

The lines that need to be edited all begin with ">". Is there a quick way to do this?
 

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PGASetRealInitRange(2)						      PGAPack						    PGASetRealInitRange(2)

NAME
PGASetRealInitRange - sets the upper and lower bounds for randomly initializing real-valued genes. DESCRIPTION
For each gene these bounds define an interval from which the initial allele value is selected uniformly randomly. The user specifies two arrays containing lower and bound for each gene to define the interval. This is the default strategy for initializing real-valued strings. The default interval is $[0,1.0]$ for each gene. INPUT PARAMETERS
ctx - context variable min - array containing the lower bound of the interval for each gene mac - array containing the upper bound of the interval for each gene OUTPUT PARAMETERS
none SYNOPSIS
#include "pgapack.h" void PGASetRealInitRange(ctx, min, max) PGAContext *ctx double *min double *max LOCATION
real.c EXAMPLE
Set the initialization routines to select a value for each real-valued gene i uniformly randomly from the interval [-10.,i] Assumes all strings are of the same length. PGAContext *ctx; double *low, *high; int i, stringlen; : stringlen = PGAGetStringLength(ctx); low = (double *) malloc(stringlen*sizeof(double)); high = (double *) malloc(stringlen*sizeof(double)); for(i=0;i<stringlen;i++) { low[i] = -10.0; high[i] = i; } PGASetRealInitRange(ctx, low, high); 05/01/95 PGASetRealInitRange(2)
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