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Full Discussion: Help in awk/bash
Top Forums Shell Programming and Scripting Help in awk/bash Post 302750057 by bioinfo on Sunday 30th of December 2012 10:40:36 PM
Old 12-30-2012
Hi,
Thanks a lot , I have done it. Smilie
I have got the following output for all files (just showing for one file and naming it as o.txt) :
Code:
100.000        0.51332	   0.0000001923	 -191.04738     a.txt
2000.000	   0.49573	   0.0000015512	 -191.40071     a.txt
1000.000	   0.51047	   0.0000028339	 -190.92254     a.txt

Further, I need your help. I have 10 more files, all of same format (11.txt) as follows, showing 2 repeats from this file:
Code:
ATOM      1  N    SER A   1      35.092  83.194 140.076  1.00  0.00           N  
ATOM      2  CA  SER A   1      35.216  83.725 138.725  1.00  0.00           C  
ATOM      3  C    SER A   1      36.530  84.485 138.538  1.00  0.00           C  
TER
ENDMDL
ATOM      1  N   SER A   1      35.683  81.326 139.778  1.00  0.00           N  
ATOM      2  CA  SER A   1      35.422  82.736 139.929  1.00  0.00           C  
ATOM      3  C   SER A   1      36.497  83.588 139.247  1.00  0.00           C  
TER
ENDMDL

ENDMDL is coming around 10000 times in each file. If I give input of 100 at $1 from o.txt, then it should output the first repeat from 11. txt ending with ENDMDL.
Code:
ATOM      1  N    SER A   1      35.092  83.194 140.076  1.00  0.00           N  
ATOM      2  CA  SER A   1      35.216  83.725 138.725  1.00  0.00           C  
ATOM      3  C    SER A   1      36.530  84.485 138.538  1.00  0.00           C  
TER
ENDMDL

So, corresponding to first column of o.txt, I want to retreive the repeat at the number $1/100 from 11.txt i.e. if $1=2000, then I want to retreive the pattern where ENDMDL is at 20 place.


Please guide me.

Thanks again

---------- Post updated at 10:40 PM ---------- Previous update was at 09:52 PM ----------

Please guide me. Its urgent. Smilie

Thanks

Last edited by Scrutinizer; 12-31-2012 at 03:53 AM.. Reason: code tags
 

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ATR_ANALYSIS(1p)						   User Commands						  ATR_ANALYSIS(1p)

NAME
ATR_analysis - analyse a smart card ATR SYNOPSIS
ATR_analysis [ATRstring] DESCRIPTION
ATR_analysis is used to parse the ATR (Answer To Reset) sent by a smart card. The command also tries to find the card model using an ATR database stored in a text file smartcard_list.txt. The smartcard_list.txt file is searched in ./, /usr/local/pcsc/ and /usr/share/pcsc/ directories. Exemple: $ ATR_analysis '3B A7 00 40 18 80 65 A2 08 01 01 52' ATR: 3B A7 00 40 18 80 65 A2 08 01 01 52 + TS = 3B --> Direct Convention + T0 = A7, Y(1): 1010, K: 7 (historical bytes) TB(1) = 00 --> Programming Param P: 0, I: 0 TD(1) = 40 --> Y(i+1) = 0100, Protocol T = 0 ----- TC(2) = 18 --> Work waiting time: 960 x 24 x (Fi/F) + Historical bytes: 80 65 A2 08 01 01 52 Possibly identified card: 3B A7 00 40 18 80 65 A2 08 01 01 52 Gemplus GPK8000 BUGS
Maybe many bugs since I am not a ISO 7816 expert. FILES
smartcard_list.txt SEE ALSO
pcscd(8), pcsc_scan(1) AUTHOR
Ludovic Rousseau <ludovic.rousseau@free.fr> Version: 1.3 October 2005 ATR_ANALYSIS(1p)
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