I need to combine both codes
So I can get the desired output
I have been trying but I just cannot get the code to do what I want.
Can anyone explain me how can I combine them?
Thanks!
Hi,
Is there any way to change one date format to another ?? I mean I have a file having dates in the format (Thu Sep 29 2005) ... and i wud like to change these to YYYYMMDD format .. is there any command which does so ?? Or anything like enum which we have in C ??
Thanks in advance,
... (5 Replies)
Hi,
There are lots of threads about how to manipulate the date using date +%m %.......
But how can I change the default format of the commad date?
$ date
Mon Apr 10 10:57:15 BST 2006
This would be on fedora and SunOs.
Cheers,
Neil (4 Replies)
Dear Experts,
Currently my script is gereating the output like this as mentioned below.
8718,8718,0,8777
7450,7450,0,7483
5063,5063,0,5091
3840,3840,0,3855
3129,3129,0,3142
2400,2400,0,2419
2597,2597,0,2604
3055,3055,0,3078
4249,4249,0,4266
4927,4927,0,4957
8920,8920,0,8978... (4 Replies)
Hi, I have a column in a table of Timestamp datatype. For Example : Var1 is the column 2008-06-26-10.10.30.2006. I have Given query as date(var1) and time (var1) I got the file as in the below format :
File1:
Col1 Col2
2008-06-02|12.36.06
2008-06-01|23.36.35
But the problem is... (7 Replies)
i have an variable mydate=2008Nov07
i want o/p as in variable mymonth=11 (i.e nov comes on 11 number month)
i want some command to do this for any month without using any loop.
plz help me (1 Reply)
Hi,
I'm in need of creating a file in the fasta format:
>1A6A.A
HVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITN
VPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCR
VEHWGLDEPLLKHWEF
>1A6A.B ... (5 Replies)
I have a list of dates in the following format: mm/dd/yyyy and want to change these to the MySQL standard format: yyyy-mm-dd.
The dates in the original file may or may not be zero padded, so April is sometimes "04" and other times simply "4".
This is what I use to change the format:
sed -i '' -e... (2 Replies)
Hi all,
I have a file with below data
af23b|11-FEB-12|acc7
ad23b|12-JAN-12|acc4
as23b|15-DEC-11|acc5
z123b|18-FEB-12|acc1
I need the output as below:-(date in yyyymmdd format)
af23b|20120211|acc7
ad23b|20120112|acc4
as23b|20111215|acc5
z123b|20120218|acc1
Please help me on this.... (7 Replies)
Hi,
I am having a file of dna sequences in fasta format which look like this:
>admin_1_45
atatagcaga
>admin_1_46
atatagcagaatatatat
with many such thousands of sequences in a single file. I want to the replace the accession Id "admin_1_45" similarly in following sequences to... (5 Replies)
Hello all,
I am tryign to change the format of files (which are many in numbers). They at present are named like this:
SomeProcess_M-130_100_1_3BR.root
SomeProcess_M-130_101_2_3BX.root
SomeProcess_M-130_103_3_3RY.root
SomeProcess_M-130_105_1_3GH.root
SomeProcess_M-130_99_1_3LF.root... (7 Replies)
Discussion started by: emily
7 Replies
LEARN ABOUT DEBIAN
seqstat
seqstat(1) Biosquid Manual seqstat(1)NAME
seqstat - show statistics and format for a sequence file
SYNOPSIS
seqstat [options] seqfile
DESCRIPTION
seqstat reads a sequence file seqfile and shows a number of simple statistics about it.
The printed statistics include the name of the format, the residue type of the first sequence (protein, RNA, or DNA), the number of
sequences, the total number of residues, and the average and range of the sequence lengths.
OPTIONS -a Show additional verbose information: a table with one line per sequence showing name, length, and description line. These lines are
prefixed with a * character to enable easily grep'ing them out and sorting them.
-h Print brief help; includes version number and summary of all options, including expert options.
-B (Babelfish). Autodetect and read a sequence file format other than the default (FASTA). Almost any common sequence file format is
recognized (including Genbank, EMBL, SWISS-PROT, PIR, and GCG unaligned sequence formats, and Stockholm, GCG MSF, and Clustal align-
ment formats). See the printed documentation for a complete list of supported formats.
EXPERT OPTIONS --informat <s>
Specify that the sequence file is in format <s>, rather than the default FASTA format. Common examples include Genbank, EMBL, GCG,
PIR, Stockholm, Clustal, MSF, or PHYLIP; see the printed documentation for a complete list of accepted format names. This option
overrides the default expected format (FASTA) and the -B Babelfish autodetection option.
--quiet
Suppress the verbose header (program name, release number and date, the parameters and options in effect).
SEE ALSO afetch(1), alistat(1), compalign(1), compstruct(1), revcomp(1), seqsplit(1), sfetch(1), shuffle(1), sindex(1), sreformat(1), stranslate(1),
weight(1).
AUTHOR
Biosquid and its documentation are Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU
General Public License (GPL) See COPYING in the source code distribution for more details, or contact me.
Sean Eddy
HHMI/Department of Genetics
Washington University School of Medicine
4444 Forest Park Blvd., Box 8510
St Louis, MO 63108 USA
Phone: 1-314-362-7666
FAX : 1-314-362-2157
Email: eddy@genetics.wustl.edu
Biosquid 1.9g January 2003 seqstat(1)