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I would also like to add that, at least for me personally and speaking in sweeping generalities which I don't like to do; I feel less secure with "closed code" than "open code".
For me, I can easily trust what I can see. I can search open code more easily (and look for problems) than I can search a binary or encrypted code like encrypted PHP (which I cannot search at all).
Recently, I refused to install encrypted PHP on a web site for that exact reason. I do not trust code I cannot see and see no reason to install encrypted PHP code when I can find open alternatives.
As I mentioned before, I don't normally like to respond to generalizations without context, so I am simply providing my personal opinion, and that is that I (my personal opinion) feel more secure when I can examine the code, grep it, search it, add debug statements, etc.
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