Hi
I am writing a script file which sends the log files along with their size in a folder named log to a file called temp.log using the following cmd:
ls -st 190_GSTV_HUX_003QISCGSK026** >> /home/user/temp.log
the temp.log looks like this:
16 190_GSTV_HUX_003QISCGSK026_message070321.log
... (11 Replies)
Hi,
I have a text file, foo.txt, it looks something like below. In the file there is a line that gives the date in the form of: Mon Jun 15 11:09:31 2008. I need to find which date is the newest and then store certain details of that list data to another file. So, in this sample text file, I... (6 Replies)
Hi,
I need to execute a crontab based on a condition where one SH file should be executed only based on the output of a file in a folder.
I have written the following cron job which is not working.
00 01 * * * read a < /px/batch/reslut.txt && && sh /px/batch/check.sh
where my... (2 Replies)
I know how to check if any file has a unix process using a file by looking at 'lsof <fullpath/filename>' command.
I think using lsof is very expensive. Also to make it accurate we need to inlcude fullpath of the file.
Is there another command that can tell if a file has a truely active... (12 Replies)
This should be a simple script, but can't find one with google search.
I just need to find the file that is in many directories, then overwrite that file with a newer version i.e.
find file.jar then overwrite with /root/file.jar
All I get in searches is substitute text with new test inside... (1 Reply)
CMD=$(find "${Release_Container}" -iname "${Release_Name}"_Release.txt)
for i in `cat $CMD`
do
if ];then
cd ${Sandbox_dir}
CMD1=$(find "${Sandbox_dir}"/* -iname "${Release_Name}" -type d | awk -F/ '{print $(NF)}' | head -1 )
if ];then
echo -e "################### CHECKOUT START... (2 Replies)
Hello,
Can you please help me one this:
I have two servers: Server A and server B.
Every day on 03.00AM in only one on these two servers (randomly)is generated one file, lets say file.txt.
I want to copy this file also to the other server.
I want to create a perl script that does... (2 Replies)
I am fairly new to programming and trying to resolve this problem. I have the file like this.
CHROM POS REF ALT 10_sample.bam 11_sample.bam 12_sample.bam 13_sample.bam 14_sample.bam 15_sample.bam 16_sample.bam
tg93 77 T C T T T T T
tg93 79 ... (4 Replies)
Dear All,
I'm new to unix scripting. I'm trying to write an utility script which has to check if one file is newer than another one. $3 $4 $5 $6 are files .txt. Help me please.
for i in $3 $4 $5 $6
do
if
then
echo "$1 is newer than $i"
else
echo "$i is newer than $1"
fi (9 Replies)
I only want the file copied if it is newer. But it still copies the file?
zip -u Ubuntu_Documents.zip ./*
cp -u Ubuntu_Documents.zip $DOCS_Backup/Ubuntu_Documents_`date +"%Y-%m-%d-%H-%M"`.zip (5 Replies)
Discussion started by: drew77
5 Replies
LEARN ABOUT DEBIAN
warpimagemultitransform
WARPIMAGEMULTITRANSFORM(1) User Commands WARPIMAGEMULTITRANSFORM(1)NAME
WarpImageMultiTransform - part of ANTS registration suite
DESCRIPTION
Usage:
./WarpImageMultiTransform ImageDimension moving_image output_image -R reference_image --use-NN SeriesOfTransformations--(See Below)
SeriesOfTransformations --- ./WarpImageMultiTransform can apply, via concatenation, an unlimited number of transformations to your
data . Thus, SeriesOfTransformations may be an Affine transform followed by a warp another affine and then another warp.
Inverse affine transformations are invoked by calling
-i MyAffine.txt
InverseWarps are invoked by passing the InverseWarp.nii.gz
filename (see below for a note about this).
Example 1: Mapping a warped image into the reference_image domain by applying abcdWarpxvec.nii.gz/abcdWarpyvec.nii.gz/abcd-
Warpzvec.nii.gz and then abcdAffine.txt
./WarpImageMultiTransform 3 moving_image output_image -R reference_image abcdWarp.nii.gz abcdAffine.txt
Example 2: To map the fixed/reference_image warped into the moving_image domain by applying the inversion of abcdAffine.txt and then
abcdInverseWarpxvec.nii.gz/abcdInverseWarpyvec.nii.gz/abcdInverseWarpzvec.nii.gz .
./WarpImageMultiTransform 3 reference_image output_image -R moving_image -i abcdAffine.txt abcdInverseWarp.nii.gz
Note that the inverse maps (Ex. 2) are passed to this program in the reverse order of the forward maps (Ex. 1).
This makes sense, geometrically ... see ANTS.pdf for visualization of this syntax.
Compulsory arguments:
ImageDimension: 2 or 3 (for 2 or 3 Dimensional registration)
moving_image: the image to apply the transformation to
output_image: the resulting image
Optional arguments:
-R: reference_image space that you wish to warp INTO.
--tightest-bounding-box: Computes the tightest bounding box using all the affine transformations. It will be overrided by -R refer-
ence_image if given. --reslice-by-header: equivalient to -i -mh, or -fh -i -mh if used together with -R. It uses the orientation
matrix and origin encoded in the image file header. It can be used together with -R. This is typically not used together with any
other transforms.
--use-NN: Use Nearest Neighbor Interpolation.
--use-BSpline: Use 3rd order B-Spline Interpolation.
-i: will use the inversion of the following affine transform.
Other Example Usages: Reslice the image: WarpImageMultiTransform 3 Imov.nii.gz Iout.nii.gz --tightest-bounding-box
--reslice-by-header Reslice the image to a reference image: WarpImageMultiTransform 3 Imov.nii.gz Iout.nii.gz -R Iref.nii.gz
--tightest-bounding-box --reslice-by-header
Important Notes: Prefixname "abcd" without any extension will use ".nii.gz" by default The abcdWarp and abcdInverseWarp do not
exist. They are formed on the basis of abcd(Inverse)Warpxvec/yvec/zvec.nii.gz when calling ./WarpImageMultiTransform, yet you have
to use them as if they exist.
WarpImageMultiTransform 1.9 May 2012 WARPIMAGEMULTITRANSFORM(1)